Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01143 ATGGGTTGTCACGGCAGCAAGGAGAAAAAATCAAACGCAGAATTCAGCAGTGCCTATGGATCAGGCACTCGTAGTGGCAGTGGTGGTCACAATACTGTTCAACAACCTCCTACCACCACTGTTGCACAGGTTCAAACATCACCACCACCCAAACCACAACCACATTCAGAGGTGGTAGCGAGTCCACCAAAACCGAAACTTTCTCCGACCCAGAATGCCAGGGCGGTGCAGAAACCCGACGCCACGATTCTGGGGAAACCCTTTGAGGATATAAAGAAGTACTACAGTCTGGGGAAGGAACTGGGAAGAGGGCAATTCGGGATAACGTATCTGTGCACGGAGAATGCGACCGGAATGACTTACGCTTGCAAGTCGATTCTGAAGAGGAAGCTGGTGTCGAGAGCGGACAGGGAGGACATGAAGAGGGAGATTCAGATCATGCAGCATTTGTCTGGGCAGAACAACATTGTGGAGTTCAAGGGGGCATTCGAGGACAGGATGTCGGTCCACCTTGTAATGGAACTCTGCGCCGGCGGGGAGCTCTTCGACCGGATCATCGCCCAAGGCCACTACTCCGAGAGAGCCGCCGCCTCACTCTGCCGCGCCATGGTCAACGTTGTTCACATTTGCCATTTCATGGGAGTCTTGCACCGCGATCTCAAGCCCGAAAATTTCCTGCTCTCTACTAAGGATGACGATGCTACGCTCAAGGCTACTGATTTTGGACTCTCTGTCTTCATTGAAGAAGGGAAGGTATATCATGATATGGTTGGCAGTGCTTACTATGTTGCTCCCGAGGTATTGCGCCGTAGTTATGGAAAGGAAATAGATATTTGGAGTGCAGGCGTCATATTGTATATTCTTCTCAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAACGCCATATTGGAAGGTGAACTTGATTTTGTAAGTGAACCATGGCCATCCATATCAGACAGCGCTAAAGATCTAGTCAGGAAGATGCTGACACAAGATCCGAAGAAGAGGATTACTTCTGCTCAAGTCCTTGAACACCCATGGATGAGAGAAGGCGGAGAGGCATCCGATAAACCAATTGATAGTGCAGTTCTATCCAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAGAAGCTAGCATTGAAGGTTATTGCTGAAAATCTATCAGAAGAGGAGATTAAAGGTCTGAAAGCAATGTTTGCAAATATGGACACTGACAACAGTGGCACAATTACCTACGAAGAATTGAAGACCGGCTTAGCTCGAATTGGATCAAGGTTGTCCGAGGCTGAAGTGAAGCAACTCATGGATGCTGCTGATGTTGATGGAAATGGGTCAATTGACTATCTTGAATTCATTTCGGCTACAATGCATAGGCACAGACTTGAACGTGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGATAACAGTGGGTACATCACTAGAGATGAATTGGAGACTGCTATGACACAACATGGAATGGGTGATGAAGCAACAATAAAGGAAATAATATCTGAAGTGGATACAGATAATGATGGAAGAATAAACTATGAGGAATTTTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGAGGGTCAACCACTTTAAATCCACTGATTGGTTGA 1653 0.4622 MGCHGSKEKKSNAEFSSAYGSGTRSGSGGHNTVQQPPTTTVAQVQTSPPPKPQPHSEVVASPPKPKLSPTQNARAVQKPDATILGKPFEDIKKYYSLGKELGRGQFGITYLCTENATGMTYACKSILKRKLVSRADREDMKREIQIMQHLSGQNNIVEFKGAFEDRMSVHLVMELCAGGELFDRIIAQGHYSERAAASLCRAMVNVVHICHFMGVLHRDLKPENFLLSTKDDDATLKATDFGLSVFIEEGKVYHDMVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANMDTDNSGTITYEELKTGLARIGSRLSEAEVKQLMDAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGGSTTLNPLIG* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01143 550 CDD STKc_CAMK 95 352 - -
Phac3g01143 550 ProSiteProfiles EF-hand calcium-binding domain profile. 504 538 IPR002048 GO:0005509
Phac3g01143 550 ProSitePatterns Protein kinases ATP-binding region signature. 101 128 IPR017441 GO:0005524
Phac3g01143 550 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
Phac3g01143 550 Pfam EF-hand domain pair 401 461 IPR002048 GO:0005509
Phac3g01143 550 Pfam EF-hand domain pair 471 533 IPR002048 GO:0005509
Phac3g01143 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Phac3g01143 550 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Phac3g01143 550 Gene3D Transferase(Phosphotransferase) domain 1 181 360 - -
Phac3g01143 550 FunFam Calcium-dependent protein kinase 1 97 180 - -
Phac3g01143 550 MobiDBLite consensus disorder prediction 1 81 - -
Phac3g01143 550 Gene3D - 361 535 - -
Phac3g01143 550 CDD EFh 475 533 IPR002048 GO:0005509
Phac3g01143 550 ProSiteProfiles Protein kinase domain profile. 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01143 550 PANTHER SERINE/THREONINE-PROTEIN KINASE 89 528 - -
Phac3g01143 550 Gene3D Phosphorylase Kinase; domain 1 97 180 - -
Phac3g01143 550 MobiDBLite consensus disorder prediction 12 46 - -
Phac3g01143 550 Pfam Protein kinase domain 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01143 550 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
Phac3g01143 550 SMART efh_1 507 535 IPR002048 GO:0005509
Phac3g01143 550 SMART efh_1 400 428 IPR002048 GO:0005509
Phac3g01143 550 SMART efh_1 436 464 IPR002048 GO:0005509
Phac3g01143 550 SMART efh_1 472 500 IPR002048 GO:0005509
Phac3g01143 550 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Phac3g01143 550 FunFam calcium-dependent protein kinase 1 181 360 - -
Phac3g01143 550 SUPERFAMILY EF-hand 392 532 IPR011992 -
Phac3g01143 550 ProSitePatterns EF-hand calcium-binding domain. 516 528 IPR018247 -
Phac3g01143 550 SMART serkin_6 95 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g01143 550 SUPERFAMILY Protein kinase-like (PK-like) 93 361 IPR011009 -
Phac3g01143 550 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Phac3g01143 550 FunFam Calcium-dependent protein kinase 1 361 536 - -
Phac3g01143 550 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01143 Phac-Chr3 11391826 11396754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01143 1 535 EF-hand Containing Proteins AT4G04720 75.373 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac3g01143 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01143 K13412 - gmx:100816859 930.243