Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01096 ATGTATGAGGGATTGGAGCAGCAGATGCCTTCCTTCAATCTGCCTTCTAAAATATTATGTAAAGTGGTCAATGTTCATCTTCGGGCTGAATCCGAAACAGATGAAGTATATGCACAAATAACTTTGCTTCCTGAATTAGATCAAAGTGAGGTGACCAGCCCTGATGATCCTCTGACAGAATCTACAAGGGTCAAGATCCATTCATTTTGCAAGACACTTACTGCTTCTGATACCAGTACCCATGGGGGTTTCTCTGTTCTTCGAAGACATGCGGATGATTGTCTACCTCCCTTGGATATGTCACAGCAACCACCATGGCAAGAACTGGTTGCAACTGATTTACATGGGAATGAATGGCATTTTAGACATATTTTTCGAGGGCAACCCAAGCGCCACTTACTTACCACTGGGTGGAGTGTCTTTGTCAGTTCCAAAAAATTAGTGGCTGGTGATGCCTTTATATTCTTAAGGGGTGAAAATGGAGAGCTGAGAGTTGGGGTTAGGAGGGTGATGAGACAGCAGAGCAATGTGCCTTCTTCTGTTATATCTAGCCACAGTATGCATTTAGGTGTTCTGGCCACTGCATCTCATGCCATTGCCACTGGAACACTGTTTTCTGTGTTTTACAAGCCCAGAACAAGCCGGTCAGAGTTTATTGTGAGTGTCAACAAATATCTGGAAGCTAAGAGTCATAAACTCGCTGTTGGGATGAGATTTAAAATGAGATTTGAAGGTGATGAAATTCCCGAAAGAAGGTTCAGTGGCACAATTGTGGGTGTTGGAGATAATAAATCATCAGTGTGGCCTGATTCCGAATGGCGATCATTAAAGGTTCAGTGGGATGAACCATTGTCAATTTTGCGCCCTGATAGAGTTTCTTCATGGGAATTGGAGCCACATGTCTCAACCACTCCTGCAAACCCACAGCCAACACAAAGAAACAAGAGGGCACGGCCTCTTATTCTACCTTCTACAATGCCTGATTCATCTTTGCAAGGCATGTGGAAATCTCCAGTTGAATCTACATCTTTCTCTTATTGTGATCCTCAACATGGGCGTGGCCTCTATTCATCACCCAAGTTCTATCCTTCTGCAACTATTCTTGGTTTTAGTGGGAATGGCTTTGTGGGACCTCCTTCCAACAAATCAATATATTGGTCTAATAGGGTGCAAAATTTCTTGGAATCAATGTCAGATACAGTCCCTAAAGAAGCTAGAGAGAAGAGACAAGACACTGGAAATGGCTGCAGACTCTTTGGGATCCAGCTACTTGAGAATTCTAATGCAGAAGAATGTCTACAAACAGTCACTTTGTCTGGAAGGTTAGGTGATGATAGGTTTGTTCCATCTTTAGATGCTGAATCTGATCAGCCTTCAGTAAGTTGCGATGCTGAAAAATCATGCCTGTCTCCCCAGGAGTTGCAAAGCAGGCAAATAAGGAGCTGTACGAAGGTTCACATGCAAGGAATGGCCGTTGGGAGGGCTGTGGATTTAACACGATTTCATGGATACGAAGATCTGCTCAAGAAATTGGAGGAGATGTTTGATATCAAGGCTGAGCTGTGTGGGTCCATAAAAAAATGGCAGGTTGTCTACACTGATAATGAAGATGATACCATGATGGTTGGGGACGACCCATGGGATGAGTTTTGTAGTGTTGTGAGGAAAATTTTCATATATACGGCAGAAGAGGTGAAGAAGCTTTCCCCAAAAATAGGACTTTCAATGAATGAAAATAGGACTTCGAATCCCGAGGAGCAGTCGTCTAATGTGGGACCCAGTTGCTAG 1788 0.434 MYEGLEQQMPSFNLPSKILCKVVNVHLRAESETDEVYAQITLLPELDQSEVTSPDDPLTESTRVKIHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAKSHKLAVGMRFKMRFEGDEIPERRFSGTIVGVGDNKSSVWPDSEWRSLKVQWDEPLSILRPDRVSSWELEPHVSTTPANPQPTQRNKRARPLILPSTMPDSSLQGMWKSPVESTSFSYCDPQHGRGLYSSPKFYPSATILGFSGNGFVGPPSNKSIYWSNRVQNFLESMSDTVPKEAREKRQDTGNGCRLFGIQLLENSNAEECLQTVTLSGRLGDDRFVPSLDAESDQPSVSCDAEKSCLSPQELQSRQIRSCTKVHMQGMAVGRAVDLTRFHGYEDLLKKLEEMFDIKAELCGSIKKWQVVYTDNEDDTMMVGDDPWDEFCSVVRKIFIYTAEEVKKLSPKIGLSMNENRTSNPEEQSSNVGPSC* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01096 595 FunFam Auxin response factor 67 171 - -
Phac3g01096 595 FunFam Auxin response factor 475 569 - -
Phac3g01096 595 SUPERFAMILY DNA-binding pseudobarrel domain 61 198 IPR015300 -
Phac3g01096 595 CDD B3_DNA 67 169 IPR003340 GO:0003677
Phac3g01096 595 FunFam Auxin response factor 232 304 - -
Phac3g01096 595 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 569 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac3g01096 595 Pfam AUX/IAA family 479 570 IPR033389 -
Phac3g01096 595 MobiDBLite consensus disorder prediction 574 595 - -
Phac3g01096 595 Pfam Auxin response factor 195 277 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac3g01096 595 SUPERFAMILY CAD & PB1 domains 483 557 - -
Phac3g01096 595 ProSiteProfiles PB1 domain profile. 480 573 IPR000270 GO:0005515
Phac3g01096 595 SMART B3_2 69 171 IPR003340 GO:0003677
Phac3g01096 595 Gene3D - 232 305 - -
Phac3g01096 595 Gene3D - 475 569 - -
Phac3g01096 595 Pfam B3 DNA binding domain 69 169 IPR003340 GO:0003677
Phac3g01096 595 Gene3D - 66 171 IPR015300 -
Phac3g01096 595 ProSiteProfiles B3 DNA-binding domain profile. 69 171 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01096 Phac-Chr3 10904392 10913147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01096 1 577 B3 DNA Binding Superfamily AT1G59750 69.529 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac3g01096 AUX_IAA 7e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01096 K14486 - gmx:100815450 1045.8