Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01095 ATGGCATTCTCTGCTTCAACACACAAATCTGCGGGACTTCTTCCAGGGGCAGTCAATGATGATTTATACAAGGAGTTGTGGCATGCCTGTGCTGGTCCCCTTGTCACTCTCCCTCGTGAAGGGGAGCGAGTTTATTACTTTCCACAAGGTCACATGGAACAGCTTGAGGCATCGATGTATGAGGGATTGGAGCAGCAGATGCCTTCCTTCAATCTGCCTTCTAAAATATTATGTAAAGTGGTCAATGTTCATCTTCGGGCTGAATCCGAAACAGATGAAGTATATGCACAAATAACTTTGCTTCCTGAATTAGATCAAAGTGAGGTGACCAGCCCTGATGATCCTCTGACAGAATCTACAAGGGTCAAGATCCATTCATTTTGCAAGACACTTACTGCTTCTGATACCAGTACCCATGGGGGTTTCTCTGTTCTTCGAAGACATGCGGATGATTGTCTACCTCCCTTGGATATGTCACAGCAACCACCATGGCAAGAACTGGTTGCAACTGATTTACATGGGAATGAATGGCATTTTAGACATATTTTTCGAGGGCAACCCAAGCGCCACTTACTTACCACTGGGTGGAGTGTCTTTGTCAGTTCCAAAAAATTAGTGGCTGGTGATGCCTTTATATTCTTAAGGGGTGAAAATGGAGAGCTGAGAGTTGGGGTTAGGAGGGTGATGAGACAGCAGAGCAATGTGCCTTCTTCTGTTATATCTAGCCACAGTATGCATTTAGGTGTTCTGGCCACTGCATCTCATGCCATTGCCACTGGAACACTGTTTTCTGTGTTTTACAAGCCCAGAACAAGCCGGTCAGAGTTTATTGTGAGTGTCAACAAATATCTGGAAGCTAAGAGTCATAAACTCGCTGTTGGGATGAGATTTAAAATGAGATTTGAAGGTGATGAAATTCCCGAAAGAAGGTTCAGTGGCACAATTGTGGGTGTTGGAGATAATAAATCATCAGTGTGGCCTGATTCCGAATGGCGATCATTAAAGGTTCAGTGGGATGAACCATTGTCAATTTTGCGCCCTGATAGAGTTTCTTCATGGGAATTGGAGCCACATGTCTCAACCACTCCTGCAAACCCACAGCCAACACAAAGAAACAAGAGGGCACGGCCTCTTATTCTACCTTCTACAATGCCTGATTCATCTTTGCAAGGCATGTGGAAATCTCCAGTTGAATCTACATCTTTCTCTTATTGTGATCCTCAACATGGGCGTGGCCTCTATTCATCACCCAAGTTCTATCCTTCTGCAACTATTCTTGGTTTTAGTGGGAATGGCTTTGTGGGACCTCCTTCCAACAAATCAATATATTGGTCTAATAGGGTGCAAAATTTCTTGGAATCAATGTCAGATACAGTCCCTAAAGAAGCTAGAGAGAAGAGACAAGACACTGGAAATGGCTGCAGACTCTTTGGGATCCAGCTACTTGAGAATTCTAATGCAGAAGAATGTCTACAAACAGTCACTTTGTCTGGAAGGTTAGGTGATGATAGGTTTGTTCCATCTTTAGATGCTGAATCTGATCAGCCTTCAGTAAGTTGCGATGCTGAAAAATCATGCCTGTCTCCCCAGGAGTTGCAAAGCAGGCAAATAAGGAGCTGTACGAAGGTTCACATGCAAGGAATGGCCGTTGGGAGGGCTGTGGATTTAACACGATTTCATGGATACGAAGATCTGCTCAAGAAATTGGAGGAGATGTTTGATATCAAGGCTGAGCTGTGTGGGTCCATAAAAAAATGGCAGGTTGTCTACACTGATAATGAAGATGATACCATGATGGTTGGGGACGACCCATGGGATGAGTTTTGTAGTGTTGTGAGGAAAATTTTCATATATACGGCAGAAGAGGTGAAGAAGCTTTCCCCAAAAATAGGACTTTCAATGAATGAAAATAGGACTTCGAATCCCGAGGAGCAGTCGTCTAATGTGGGACCCAGTTGCTAG 1962 0.4399 MAFSASTHKSAGLLPGAVNDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLEQQMPSFNLPSKILCKVVNVHLRAESETDEVYAQITLLPELDQSEVTSPDDPLTESTRVKIHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAKSHKLAVGMRFKMRFEGDEIPERRFSGTIVGVGDNKSSVWPDSEWRSLKVQWDEPLSILRPDRVSSWELEPHVSTTPANPQPTQRNKRARPLILPSTMPDSSLQGMWKSPVESTSFSYCDPQHGRGLYSSPKFYPSATILGFSGNGFVGPPSNKSIYWSNRVQNFLESMSDTVPKEAREKRQDTGNGCRLFGIQLLENSNAEECLQTVTLSGRLGDDRFVPSLDAESDQPSVSCDAEKSCLSPQELQSRQIRSCTKVHMQGMAVGRAVDLTRFHGYEDLLKKLEEMFDIKAELCGSIKKWQVVYTDNEDDTMMVGDDPWDEFCSVVRKIFIYTAEEVKKLSPKIGLSMNENRTSNPEEQSSNVGPSC* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01095 653 MobiDBLite consensus disorder prediction 632 653 - -
Phac3g01095 653 SMART B3_2 127 229 IPR003340 GO:0003677
Phac3g01095 653 Pfam B3 DNA binding domain 127 227 IPR003340 GO:0003677
Phac3g01095 653 FunFam Auxin response factor 533 627 - -
Phac3g01095 653 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 21 627 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac3g01095 653 FunFam Auxin response factor 290 362 - -
Phac3g01095 653 SUPERFAMILY CAD & PB1 domains 541 615 - -
Phac3g01095 653 CDD B3_DNA 125 227 IPR003340 GO:0003677
Phac3g01095 653 SUPERFAMILY DNA-binding pseudobarrel domain 120 256 IPR015300 -
Phac3g01095 653 Gene3D - 533 627 - -
Phac3g01095 653 Pfam AUX/IAA family 537 628 IPR033389 -
Phac3g01095 653 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Phac3g01095 653 Gene3D - 124 229 IPR015300 -
Phac3g01095 653 Pfam Auxin response factor 253 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac3g01095 653 ProSiteProfiles PB1 domain profile. 538 631 IPR000270 GO:0005515
Phac3g01095 653 Gene3D - 290 363 - -
Phac3g01095 653 FunFam Auxin response factor 125 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01095 Phac-Chr3 10904392 10913147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01095 5 635 B3 DNA Binding Superfamily AT1G59750 69.753 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac3g01095 AUX_IAA 8.1e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01095 K14486 - gmx:100815450 1145.95