Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01091 ATGTCTTCTTCAAATAAACACTGGCCAAGCATGTTCAAATCCAAGCCTTGCAATTCCCACAACCAATGGCAGCATGAAGACAACTCTTCTGTCCTGTCCACCGGATGCCAAAGAAGCCCTTATACTTCAGGAAGTGAAGAGAGAACTCCAGAACCGAAGTCAAGATGGAACCCAAAACCCGAGCAAATTCGCATTCTAGAAGCCATCTTCAATTCTGGGATGGTGAATCCCCCAAGGGATGAGATAAGGAAGATCCGGGTGCAGTTGCAGGAGTATGGCCAAGTTGGTGATGCCAATGTGTTCTACTGGTTCCAGAATCGCAAATCCAGGAGCAAGCACAAGCTCCGCCACATCCAAAACTCAAAGAACCAGAACACAGAAACACAACCGAACTCAGTTTCTCTCTCTCAAATCACACCACCTTCAACCTCATCCTCTTCCTCTGACAAATCCTCTTCAAAAGAACTAGTGCACCCAAATGGGTTTTCCTTTGGCTTCTCAAATGTCAATGATGCAGTGCCTAATTCTCCCACTGCTTCTGTGAATCAGACTTATTTTCAGTCTCACAATAACACCGATTTGCTACCACCAGCAATTGAGTCTTTATACTTTCCTTTGCACAATAATGGTCAAGGTGTAATAGTTAATAATACCATCACAACGCATGGGTTTTCTGTCCCTCAGTTCTCCAACAATATCATGCAATCTCAACCACAGTGTCAACCAAATGTTGGACCTAGCAGTACTCTTTTTCTCAACGAGATCATGAACCATGGAACCTTCTCAAATAGAGACCAAGATCAGGAAAAGGCATTAAAATTAATGCACCGTCAACAACTTAGCTTCCCTCTCACTTCATCTTCAACCACAACCCTTGTTCCCTCCATCTCAACTCTTCCATGTCCAATCACCCAACTTCAAGGTGTTGGTGGTGAGGTTACAGCAGATAGAGGAAAATGTATAGTTTTCATTAACGATGTTGCATTTGAGGTTATGAAAGGACCCTTCAACGTGCGCCAAGCCTTTGGAGATGAAGCTGTGCTTATCCACTCTTCCGGCCCTGTCCCCACCGACGACTGGGGCATTACCCTCCACCCACTGCAGCATGGTGCTTACTATTATCTGATATAA 1131 0.4465 MSSSNKHWPSMFKSKPCNSHNQWQHEDNSSVLSTGCQRSPYTSGSEERTPEPKSRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHKLRHIQNSKNQNTETQPNSVSLSQITPPSTSSSSSDKSSSKELVHPNGFSFGFSNVNDAVPNSPTASVNQTYFQSHNNTDLLPPAIESLYFPLHNNGQGVIVNNTITTHGFSVPQFSNNIMQSQPQCQPNVGPSSTLFLNEIMNHGTFSNRDQDQEKALKLMHRQQLSFPLTSSSTTTLVPSISTLPCPITQLQGVGGEVTADRGKCIVFINDVAFEVMKGPFNVRQAFGDEAVLIHSSGPVPTDDWGITLHPLQHGAYYYLI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01091 376 MobiDBLite consensus disorder prediction 1 47 - -
Phac3g01091 376 CDD homeodomain 52 114 IPR001356 GO:0003677
Phac3g01091 376 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Phac3g01091 376 Gene3D - 53 119 - -
Phac3g01091 376 MobiDBLite consensus disorder prediction 121 155 - -
Phac3g01091 376 SMART HOX_1 51 118 IPR001356 GO:0003677
Phac3g01091 376 FunFam WUSCHEL-related homeobox 11 53 120 - -
Phac3g01091 376 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Phac3g01091 376 SUPERFAMILY Homeodomain-like 46 117 IPR009057 -
Phac3g01091 376 MobiDBLite consensus disorder prediction 1 60 - -
Phac3g01091 376 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 376 IPR044557 GO:0003700|GO:0050793
Phac3g01091 376 MobiDBLite consensus disorder prediction 113 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01091 Phac-Chr3 10849187 10851382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01091 1 376 Wox Gene Family AT2G33880 42.217 6.53e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac3g01091 Homeodomain 2.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01091 - - gmx:100777643 548.125