Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01089 ATGGGCAAGAGAAAATCAGCGGCAAAGGCCCCTCCAAAGAAACGAATGGATAAACTTGACACTGTCTTTAGCTGTCCTTTCTGCAATCATGGGACCAGTGTTGAATGCAGCATTGATATGAAGAACATGATAGGGGAAGCTTCATGCAATATATGTCAAGAGAGCTTTAGCACCACCATCACAGCTTTATCTGAGCCAATAGACATATACACTGAATGGATTGATGAATGTGAGCTGGTGAACAACCAAGAAGATGATGGCGCATAG 267 0.4307 MGKRKSAAKAPPKKRMDKLDTVFSCPFCNHGTSVECSIDMKNMIGEASCNICQESFSTTITALSEPIDIYTEWIDECELVNNQEDDGA* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01089 88 FunFam Transcription elongation factor 1 homolog 15 82 - -
Phac3g01089 88 Pfam Transcription elongation factor Elf1 like 2 78 IPR007808 -
Phac3g01089 88 PANTHER UNCHARACTERIZED 1 85 IPR007808 -
Phac3g01089 88 SUPERFAMILY Zinc beta-ribbon 1 81 - -
Phac3g01089 88 Gene3D - 16 82 IPR038567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01089 Phac-Chr3 10790534 10792870 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac3g01089 Elf1 4.3e-31 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01089 K25829 - mnt:21394685 163.696