Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01047 ATGTCGCCGGCAAGAGACGTCATATCGGCGACGCCGGGAGCGTTCCGGCTGCGGTGGGACGTGTTCCTCAGCTTCAGAGGCACCGACACGCGCGGCGCCATCACGAAAGGTCTCTACGAGAGTCTGAAGGCGCGTGGGGTTCGCGTGTTCCTGGACGACGAGGGGTTGGAGCGTGGGGAAGAGGTAGCGAAGGGGCTGATGGAGGGCATTGATGACTCTGCAGCGTTCATTGTCATCATATCTCAAAACTACGCTTCTTCACACTGGTGTCTTGAGGAACTCACCAAGATTTGCGACACTCGTAAGCTCCTCTTGCCCGTTTTCTACCGGGTCGACCCGTCGCATGTCCGACACCTCTCGGGTCCCTTCCGAGCGGGTTTCGAATCGCATGAAAAAAGGTTTGATAAAAATGAGGTTTCAAAGTGGAAGGAAGCTTTGAAGAGAGTTGGTGGAATTGCTGGTTGGGTTTTTAATCACAGTGAGGAAGATGATCTGATACGGCGTTTGGTGCAAAGGGTGTTGAAAGAGTTGAGTAATACTCCTTTGGGTGTGCCTGAGTTTGCAGTGGGGCTTGAGAAACGTGTTGAGGAGGTGATGGAGGTGTTGCAAGTTCAATCCAACGGTGTCAAGGTTTTGGGGCTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTGGCCAAGGCACTTTTCAACGCCCTTGTTAACCGTTTTGAGCACCGTTGTTTCATTTCCAATGTGAGAGAAGTTTCAACAAAACATGATGGTTTGGTTTCCCTTCAAAGCAAAATCATCAAAGACCTTTTTCATGGAACAGGGTTTCCTTCCATTAATGATGTCAATGTTGGTATTTCTGCTATCAGAGGGAGAGTTAGTGAGAATCGAGTTTTACTAGTCTTAGATGATGTTGATGACGTGAAGCAGCTCGATGCTTTGATTGGTAAGAGGGAATGGTTTTATGATGGAAGCTGTGTCATAATCACAACAAGGGATACACAAGTTCTAACTCAGAATCATGTCAATGAGTTGTATGAAGTTAAAGGGTTGTATGCTTCTGAAGCGCAAGAGTTATTCAGTTACCATGCACTGAGAAGAAATAAACCACCAGACAATCTTCTGAGTCTATCAAAGAAGATAATATCCCTGACGGGAACAATGCCTTTGGCTCTGGAAGTGTTTGGTTCGTTTTTGTTTGGCAAGAGGAGGGAGGAGGAATGGGAGGATGCTGTGGAGAGACTAAGGCTAATTCGCCCTCGCCATCTTCAGGATGTGTTGAAGATAAGTTACGATGCTTTAGATGAAGAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTGTTTGTACCAATGGGAATGAAGCGAGATGATGTGATTGATGTGTTAAGAGGTTGTGGTTTTAGGGGTGAGATTGCTATCACGGTACTTGTGCAGAAATGCTTAATGAAAATCACTCAGGAGAATACTGTGTGGATGCATGATCAAATTAGAGACATGGGTAGGCAAATTGTTGTGGATGAAAGCTTTGTCGATCCTGGTGCGCGTAGTAGACTGTGGGATCGAGCTGAAATCATACCTGTTTTGAATGGTCACAAGGGAACTAGATGCGTTCAAGGTATTGTGCTTGATTTTGAGGAAGAAAGATTTTGTAAGAGAAAGGTCGGATCAGTTTTTCCGAAGAAGCTTCAATGGAGACCGAGTTTAAGAAATGTATCAGGCTACATCAAACAATGCCTTAAGAATCATCTTAAACCTCAAACAGAGGAAAACGAAGAGTTTATACTTCACACCAAATCCTTTGAACCAATGGTTAATCTGAGACAGCTTCAGATCAACAATCTGAAATTACAAGGCAAGTTTCTTCCATCTGAACTGAAGTGGCTACAATGGCAAGGATGCCCTTTAGAACGCATGCCTTTGAAATCTTGGCCACGAGAGCTGGCTGTCCTTGATCTCAAAAACAGCAAGAAAATGGAAACCTTGTGGGGATGGAATGGTTACAACAAGGTGCCACAGAAGTTAATGGTCTTGAACCTCTCCAACTGCATCCAACTCACTGCTATACCTGATTTATCTGGGTGTCGAAGTCTAGAGAAGATTGATCTGGAGAACTGCATTAATCTAACTAATATTCATGAATCAATTGGCTGTTTGAGTACCTTGCGTAGTTTAAATTTAGCGCGTTGTTCAAGCCTTATCAACCTTCCCATTGATGTCGCAGGGCTAAAACAACTGGAGAGTCTTTTTCTTTCTGGCTGCACCAAGTTAAAAGCATTGCCAGAAAACATTGGAATCCTGAAATCCTTGAAAGCACTTCATGCTAATGACACTGCTATAGCAGAGTTGCCCCAGTCCATTTTTCGCCTCACAAAACTTGAGCGGCTTGTTTTAGAAGGTTGCCGATATTTGAGAAGGCTACCTTGTTCTCTAGGACACCTATCTTCTCTGCAAGAATTGTCTCTATATCAGTCTGGGTTAGAAGAATTACCTGACTCTGTCGGATCATTAAATAACCTTGTGACACTCAATTTGATGGGATGTGAAATCACTGTAATTCCCTATTCTATAGGGAATCTCATGTCATTGACAGAACTTCTGCTTGATAGAACTAAAATTAAAGAACTCCCTGATACCGTTGGTTCTTTATCTTACCTGAGGGAATTATCAGTTGGAAACTGTAAACTTCTCACTCAATTGCCAAATTCAATTAAAAGGTTGGCCTCAGTTGTTGAGCTTCAGTTAGATGGAACAGCCGTCACAAATTTGCCAGATGAGATTGGAGAGATGAAGCTACTGAGGATACTAAAGTTGATGAATTGTATAAATCTTGAGTATTTACCAGAATCTATTGGTCAGCTAGCATCTCTTACTACATTGAACATGGTCAATGGAAATATCAAGGAATTGCCAGAATCCACTGGACGGCTAGAAAATCTTGTCAACTTGAGATTGAATAAATGCAGAATGCTCAGAAAGCTTCCAGCTTCTATAGGAGATTTGAAATCTCTATATCACTTTTTCATGGAGGAAACAGCTGTGTCAAGCCTACCTGAAAGCTTTGGGATGCTGTCAAGCTTGAGAACATTGAGAATGGGAAAGAAACCTGAAAGTAGCTTCCTTGCAGAACCTGAAGAAAACCATAGCCCTTTTGTACTAACATCTTCCTTCTGCAATCTGACCTTGCTAACTGAGCTTGATGCCCGAGCATGGAAAATATCTGGGAAAATTCCAGATGCATTTGAGAAGTTGTCACTATTGGAGACTTTAAAATTAGGCATGAATGATTTTCATAGCCTGCCTTCCAGTTTGAGGGGCCTTTGTATTCTCAAGGTCCTTTCACTGCCTAATTGCACTCAGCTTAACTCTCTCCCCTCACTTCCTTCAAGCTTGATTACGCTGAATGTTCAAAACTGTTCTTCATTAGAAACTATCCATGACATGTCAAATTTAGCGAGCCTGCAGGAGTTGAATCTCACAAACTGTGCAAAAGTGGGGGATATTCCTGGTCTTGAAAGCTTGAACTCATTGAGAAGGTTGTACCTGAGTGGTTGCATTGCATGCTCCTCACAAATACGCATGAGACTTTCGAAGGTTGCACTGAGGAATTTACAGAACTTAAGCATGCCAGGAACCAAATTACCTGAATGGTTTTCTGGACAAACTGTCAGCTTTTCCAAGCGCAAAAATCTTGAGCTAAAGGGTGTACTTGTTGGTGTTATCGTTTCAATCAACCATAACATTGATATACCCAACATGAAGAGAGATGATATGCCTGGCTTGATTGATGTTCAAGCAAATGTTCTCAAAGGGGGCAGAACTCTCTTTAGTACAGTGTTAAACATCTGTGGGGTGCCTAGGACAGATGAAGAACACATACACTTGTGTAGGTTCCATGATTACCATCAGCTGGTAGCCTTTTTAAAAGATGCTGATACATTTTGTGTGAGCAAGAGAAGTCCACCTTTTGATACGGGGTTGGAGTTAAAAAAATGTGGGGTTCATTTAATCCTTGAAGGAGATGATGATTATGAAGGAGGAGAAGAATCATTGGACAAAGGCCTACAATCTGTCTCAGAAAAATTGGCCAATTTTTTCCGCACTTCATGA 4101 0.4275 MSPARDVISATPGAFRLRWDVFLSFRGTDTRGAITKGLYESLKARGVRVFLDDEGLERGEEVAKGLMEGIDDSAAFIVIISQNYASSHWCLEELTKICDTRKLLLPVFYRVDPSHVRHLSGPFRAGFESHEKRFDKNEVSKWKEALKRVGGIAGWVFNHSEEDDLIRRLVQRVLKELSNTPLGVPEFAVGLEKRVEEVMEVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNALVNRFEHRCFISNVREVSTKHDGLVSLQSKIIKDLFHGTGFPSINDVNVGISAIRGRVSENRVLLVLDDVDDVKQLDALIGKREWFYDGSCVIITTRDTQVLTQNHVNELYEVKGLYASEAQELFSYHALRRNKPPDNLLSLSKKIISLTGTMPLALEVFGSFLFGKRREEEWEDAVERLRLIRPRHLQDVLKISYDALDEEEKCIFLDIACLFVPMGMKRDDVIDVLRGCGFRGEIAITVLVQKCLMKITQENTVWMHDQIRDMGRQIVVDESFVDPGARSRLWDRAEIIPVLNGHKGTRCVQGIVLDFEEERFCKRKVGSVFPKKLQWRPSLRNVSGYIKQCLKNHLKPQTEENEEFILHTKSFEPMVNLRQLQINNLKLQGKFLPSELKWLQWQGCPLERMPLKSWPRELAVLDLKNSKKMETLWGWNGYNKVPQKLMVLNLSNCIQLTAIPDLSGCRSLEKIDLENCINLTNIHESIGCLSTLRSLNLARCSSLINLPIDVAGLKQLESLFLSGCTKLKALPENIGILKSLKALHANDTAIAELPQSIFRLTKLERLVLEGCRYLRRLPCSLGHLSSLQELSLYQSGLEELPDSVGSLNNLVTLNLMGCEITVIPYSIGNLMSLTELLLDRTKIKELPDTVGSLSYLRELSVGNCKLLTQLPNSIKRLASVVELQLDGTAVTNLPDEIGEMKLLRILKLMNCINLEYLPESIGQLASLTTLNMVNGNIKELPESTGRLENLVNLRLNKCRMLRKLPASIGDLKSLYHFFMEETAVSSLPESFGMLSSLRTLRMGKKPESSFLAEPEENHSPFVLTSSFCNLTLLTELDARAWKISGKIPDAFEKLSLLETLKLGMNDFHSLPSSLRGLCILKVLSLPNCTQLNSLPSLPSSLITLNVQNCSSLETIHDMSNLASLQELNLTNCAKVGDIPGLESLNSLRRLYLSGCIACSSQIRMRLSKVALRNLQNLSMPGTKLPEWFSGQTVSFSKRKNLELKGVLVGVIVSINHNIDIPNMKRDDMPGLIDVQANVLKGGRTLFSTVLNICGVPRTDEEHIHLCRFHDYHQLVAFLKDADTFCVSKRSPPFDTGLELKKCGVHLILEGDDDYEGGEESLDKGLQSVSEKLANFFRTS* 1367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01047 1366 Gene3D - 175 342 IPR027417 -
Phac3g01047 1366 SMART till_3 18 152 IPR000157 GO:0007165
Phac3g01047 1366 Pfam NB-ARC domain 192 413 IPR002182 GO:0043531
Phac3g01047 1366 Gene3D Ribonuclease Inhibitor 798 893 IPR032675 -
Phac3g01047 1366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 442 IPR027417 -
Phac3g01047 1366 Gene3D - 16 174 IPR035897 -
Phac3g01047 1366 Gene3D - 348 432 IPR042197 -
Phac3g01047 1366 Gene3D Ribonuclease Inhibitor 894 1244 IPR032675 -
Phac3g01047 1366 ProSiteProfiles TIR domain profile. 17 177 IPR000157 GO:0007165
Phac3g01047 1366 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 824 IPR044974 GO:0006952
Phac3g01047 1366 SMART LRR_CC_2 880 907 IPR006553 -
Phac3g01047 1366 SMART LRR_CC_2 692 719 IPR006553 -
Phac3g01047 1366 SMART LRR_CC_2 1148 1174 IPR006553 -
Phac3g01047 1366 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
Phac3g01047 1366 SMART LRR_typ_2 764 787 IPR003591 -
Phac3g01047 1366 SMART LRR_typ_2 857 880 IPR003591 -
Phac3g01047 1366 SMART LRR_typ_2 811 834 IPR003591 -
Phac3g01047 1366 SMART LRR_typ_2 904 927 IPR003591 -
Phac3g01047 1366 SMART LRR_typ_2 1081 1104 IPR003591 -
Phac3g01047 1366 SMART LRR_typ_2 951 974 IPR003591 -
Phac3g01047 1366 Gene3D Ribonuclease Inhibitor 587 797 IPR032675 -
Phac3g01047 1366 Pfam TIR domain 19 180 IPR000157 GO:0007165
Phac3g01047 1366 PRINTS Disease resistance protein signature 714 730 - -
Phac3g01047 1366 PRINTS Disease resistance protein signature 382 396 - -
Phac3g01047 1366 PRINTS Disease resistance protein signature 211 226 - -
Phac3g01047 1366 PRINTS Disease resistance protein signature 289 303 - -
Phac3g01047 1366 SUPERFAMILY L domain-like 896 1213 - -
Phac3g01047 1366 SUPERFAMILY L domain-like 489 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01047 Phac-Chr3 10119144 10125510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01047 788 980 WRKY Transcription Factor Family AT4G12020 32.828 9.40e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01047 - - gmx:100786934 2149.01