Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01044 ATGGATCCGGGTGCGATGATGAACGAGGGTTCCTTTGCGAATAATGGGAGCGGCAATACGGCGCCGTATAGCTTGGCGGAGATCTGGCAGTTTCCGCAAGCGATTAATGGCGGCGGGGGATTGGGTCTCCGAAGCCCGCAGTTCGGACATGGGCCGGGGCAGTTTGGGGATTTCGCTCCCGGGCCCAACAATGGGCTTGGGCCCAGTAACACCAGAAAGCGGCGAGACTCCGAGGACGATTCCGCTAAGGCCGTGTCCACCAGCAATGCCGTGAATGAGGGTGATGGAAAACGTGTTAAAGCAACGGGGAATGGTGATGGTAAAGGTGAAGGAGAAGTCAGTTCAGGAAAGCCTGCGGAGCAAAGCGCAAAGCCTCCTTCGGAAGCTCCCAAGCAAGATTACATTCACGTCCGAGCCAGAAGGGGTCAAGCCACTGATAGCCACAGTCTTGCAGAACGAGCTCGAAGGGAAAAGATTAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATCGGGAAAGCGTTGGTCCTTGATGAGATAATTAATTATATCCAATCTCTTCAGCGCCAAGTTGAGTTTTTGTCAATGAAGCTTGAAGCAGTGAATTCGAGACTGAACTCCGGTATCGAAGCCTTTCCTCCTAAGGATTTTGGCCAGCATGCATTTGATCCCGCGGGCATACCGTTCGGTTCACAAGCTCCAAGAGAGTATAGCAGAGGTTCTTCACCTGAATGGTTACATATGCAGGTAGGAGGTGGTTTTGAAAGAACAACGTAG 795 0.5145 MDPGAMMNEGSFANNGSGNTAPYSLAEIWQFPQAINGGGGLGLRSPQFGHGPGQFGDFAPGPNNGLGPSNTRKRRDSEDDSAKAVSTSNAVNEGDGKRVKATGNGDGKGEGEVSSGKPAEQSAKPPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDFGQHAFDPAGIPFGSQAPREYSRGSSPEWLHMQVGGGFERTT* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01044 264 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g01044 264 CDD bHLH_AtBPE_like 133 218 - -
Phac3g01044 264 MobiDBLite consensus disorder prediction 34 132 - -
Phac3g01044 264 FunFam Basic helix-loop-helix transcription factor 140 212 - -
Phac3g01044 264 Gene3D - 140 216 IPR036638 GO:0046983
Phac3g01044 264 Pfam Helix-loop-helix DNA-binding domain 147 194 IPR011598 GO:0046983
Phac3g01044 264 Coils Coil 190 210 - -
Phac3g01044 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 193 IPR011598 GO:0046983
Phac3g01044 264 SMART finulus 149 199 IPR011598 GO:0046983
Phac3g01044 264 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 234 IPR024097 GO:0006355
Phac3g01044 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 210 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01044 Phac-Chr3 10043669 10046343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01044 1 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 60.759 5.42e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g01044 HLH 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01044 - - gmx:100784478 477.248