Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01043 ATGGATCCGGGTGCGATGATGAACGAGGGTTCCTTTGCGAATAATGGGAGCGGCAATACGGCGCCGTATAGCTTGGCGGAGATCTGGCAGTTTCCGCAAGCGATTAATGGCGGCGGGGGATTGGGTCTCCGAAGCCCGCAGTTCGGACATGGGCCGGGGCAGTTTGGGGATTTCGCTCCCGGGCCCAACAATGGGCTTGGGCCCAGTAACACCAGAAAGCGGCGAGACTCCGAGGACGATTCCGCTAAGGCCGTGTCCACCAGCAATGCCGTGAATGAGGGTGATGGAAAACGTGTTAAAGCAACGGGGAATGGTGATGGTAAAGGTGAAGGAGAAGTCAGTTCAGGAAAGCCTGCGGAGCAAAGCGCAAAGCCTCCTTCGGAAGCTCCCAAGCAAGATTACATTCACGTCCGAGCCAGAAGGGGTCAAGCCACTGATAGCCACAGTCTTGCAGAACGAGCTCGAAGGGAAAAGATTAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATCGGGAAAGCGTTGGTCCTTGATGAGATAATTAATTATATCCAATCTCTTCAGCGCCAAGTTGAGTTTTTGTCAATGAAGCTTGAAGCAGTGAATTCGAGACTGAACTCCGGTATCGAAGCCTTTCCTCCTAAGGATGTAAGTCTTGAACATTCTTGCTTTTAA 693 0.5123 MDPGAMMNEGSFANNGSGNTAPYSLAEIWQFPQAINGGGGLGLRSPQFGHGPGQFGDFAPGPNNGLGPSNTRKRRDSEDDSAKAVSTSNAVNEGDGKRVKATGNGDGKGEGEVSSGKPAEQSAKPPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNSGIEAFPPKDVSLEHSCF* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01043 230 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g01043 230 CDD bHLH_AtBPE_like 133 218 - -
Phac3g01043 230 Gene3D - 140 216 IPR036638 GO:0046983
Phac3g01043 230 MobiDBLite consensus disorder prediction 34 132 - -
Phac3g01043 230 Coils Coil 190 210 - -
Phac3g01043 230 Pfam Helix-loop-helix DNA-binding domain 147 194 IPR011598 GO:0046983
Phac3g01043 230 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 193 IPR011598 GO:0046983
Phac3g01043 230 SMART finulus 149 199 IPR011598 GO:0046983
Phac3g01043 230 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 223 IPR024097 GO:0006355
Phac3g01043 230 FunFam Basic helix-loop-helix transcription factor 140 212 - -
Phac3g01043 230 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 210 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01043 Phac-Chr3 10043669 10046343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01043 1 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 60.417 2.17e-81 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g01043 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01043 - - gmx:100784478 394.045