Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01023 ATGTTCCTTCATAAGCTCCTTGGAGTTGCTGATTATTTTTTTAAACAGAATCAGAAGTGGGTTTCTTGGTTTTCTTCTGATAAAGAATCTTTCCCAGATGAAACCAAGTTTAAGAAAAATGTTTTTTTGACTGAAAACCGTTTATGTTTGAACTCTAGCATGGGTATTATCGTTTTTGGTGTTTTGAATTCAGGCTCAAAATCCTTGGTTAATGTTGTGAATGTGAGGAATAGGCCCTTCTTCCGAGGGGTTGAGAAAGAAGAGAACGGTGATGATGAAGATTTTGATGTATTCCCCCATCAACCCGGTAAGAAAAGGAGGCTCACAAGCGAACAAGTTCAGTTCCTTGAAAGTAACTTCGAGGTCGAAAACAAGCTTGAACCCGAAAGGAAAGTCCAACTTGCAAAGGAACTTGGCATGCAACCAAGACAAGTGGCCATATGGTTCCAAAACCGTAGGGCAAGATTCAAGACCAAACAGCTGGAAAAAGACTATAGCATGTTGAAAGCTGGATATGACATTCTCAGAAGGGACTATGATAATCTCGTTCAAGAAAATGACAAGTTGAAGGAAGAGGTTTATTCTCTCATGAAGGTGATTCCCAGAGAGAAAGAGGAACAGAATTTGGATGATACCAGCTGTGATGCTGTCAACTCAGAGCATAAAGAGCAGAAGGATTTGATCATATATAGAGGTTCTGAAAATGGATCCAAAGTGGCACTTCCTGTTATGGTAGTAAGCAAACAGACAAATGCTAATTCAGCTAAAAGTGATGTGCTTGATTCGGAGAGCCCACATCTCACTGATGGAAACCAATCCTCACTCTTTGAGCCTGCAGATTCCTCTCATGCTTTGGAACCAGACCACTCGAATTTCTCACAAGAAGCGGAAGACATCCTCAGCCAAAACATCTTGACCATGCCATTCCTACCAATGTTTGAAGTTGAATATGTCTGCTATGATGAACCACCTGAAAATCCTTGCATGTTCCGCTTCCCAGTTGAAGATCAAACCTTCTGTTTTTGGTAA 1029 0.4072 MFLHKLLGVADYFFKQNQKWVSWFSSDKESFPDETKFKKNVFLTENRLCLNSSMGIIVFGVLNSGSKSLVNVVNVRNRPFFRGVEKEENGDDEDFDVFPHQPGKKRRLTSEQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQLEKDYSMLKAGYDILRRDYDNLVQENDKLKEEVYSLMKVIPREKEEQNLDDTSCDAVNSEHKEQKDLIIYRGSENGSKVALPVMVVSKQTNANSAKSDVLDSESPHLTDGNQSSLFEPADSSHALEPDHSNFSQEAEDILSQNILTMPFLPMFEVEYVCYDEPPENPCMFRFPVEDQTFCFW* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01023 342 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 94 263 IPR045224 GO:0003700
Phac3g01023 342 SUPERFAMILY Homeodomain-like 93 161 IPR009057 -
Phac3g01023 342 Gene3D - 99 165 - -
Phac3g01023 342 SMART HOX_1 101 163 IPR001356 GO:0003677
Phac3g01023 342 Pfam Homeodomain 104 157 IPR001356 GO:0003677
Phac3g01023 342 ProSitePatterns 'Homeobox' domain signature. 134 157 IPR017970 GO:0000981|GO:0006355
Phac3g01023 342 ProSiteProfiles 'Homeobox' domain profile. 99 159 IPR001356 GO:0003677
Phac3g01023 342 CDD homeodomain 102 160 IPR001356 GO:0003677
Phac3g01023 342 MobiDBLite consensus disorder prediction 252 288 - -
Phac3g01023 342 Pfam Homeobox associated leucine zipper 159 197 IPR003106 GO:0006355|GO:0043565
Phac3g01023 342 Coils Coil 172 199 - -
Phac3g01023 342 PRINTS Lambda-repressor HTH signature 130 139 IPR000047 GO:0003677
Phac3g01023 342 PRINTS Lambda-repressor HTH signature 139 155 IPR000047 GO:0003677
Phac3g01023 342 MobiDBLite consensus disorder prediction 252 279 - -
Phac3g01023 342 FunFam homeobox-leucine zipper protein ATHB-6-like 107 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01023 Phac-Chr3 9714924 9717288 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01023 61 291 Homeobox Transcription Factor Family AT3G01470 42.128 1.46e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac3g01023 Homeodomain 8.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01023 - K09338 gmx:100804328 435.647