Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01021 ATGCCTGGTGAGATGCTTAATGGGGGTTCAAGCATGACACTTCTACTCCAAAAAGAAAGGCTTCCATCATCCCCTGAGCTTATCCAAACCTCTTGGGTTCAAAACTCTGAACCTTCTTTCCAAGGCTCAAAATCCTTGGTTAATGTTGTGAATGTGAGGAATAGGCCCTTCTTCCGAGGGGTTGAGAAAGAAGAGAACGGTGATGATGAAGATTTTGATGTATTCCCCCATCAACCCGGTAAGAAAAGGAGGCTCACAAGCGAACAAGTTCAGTTCCTTGAAAGTAACTTCGAGGTCGAAAACAAGCTTGAACCCGAAAGGAAAGTCCAACTTGCAAAGGAACTTGGCATGCAACCAAGACAAGTGGCCATATGGTTCCAAAACCGTAGGGCAAGATTCAAGACCAAACAGCTGGAAAAAGACTATAGCATGTTGAAAGCTGGATATGACATTCTCAGAAGGGACTATGATAATCTCGTTCAAGAAAATGACAAGTTGAAGGAAGAGGTTTATTCTCTCATGAAGGTGATTCCCAGAGAGAAAGAGGAACAGAATTTGGATGATACCAGCTGTGATGCTGTCAACTCAGAGCATAAAGAGCAGAAGGATTTGATCATATATAGAGGTTCTGAAAATGGATCCAAAGTGGCACTTCCTGTTATGGTAGTAAGCAAACAGACAAATGCTAATTCAGCTAAAAGTGATGTGCTTGATTCGGAGAGCCCACATCTCACTGATGGAAACCAATCCTCACTCTTTGAGCCTGCAGATTCCTCTCATGCTTTGGAACCAGACCACTCGAATTTCTCACAAGAAGCGGAAGACATCCTCAGCCAAAACATCTTGACCATGCCATTCCTACCAATGTTTGAAGTTGAATATGTCTGCTATGATGAACCACCTGAAAATCCTTGCATGTTCCGCTTCCCAGTTGAAGATCAAACCTTCTGTTTTTGGTAA 960 0.4292 MPGEMLNGGSSMTLLLQKERLPSSPELIQTSWVQNSEPSFQGSKSLVNVVNVRNRPFFRGVEKEENGDDEDFDVFPHQPGKKRRLTSEQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQLEKDYSMLKAGYDILRRDYDNLVQENDKLKEEVYSLMKVIPREKEEQNLDDTSCDAVNSEHKEQKDLIIYRGSENGSKVALPVMVVSKQTNANSAKSDVLDSESPHLTDGNQSSLFEPADSSHALEPDHSNFSQEAEDILSQNILTMPFLPMFEVEYVCYDEPPENPCMFRFPVEDQTFCFW* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01021 319 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Phac3g01021 319 Pfam Homeobox associated leucine zipper 136 174 IPR003106 GO:0006355|GO:0043565
Phac3g01021 319 FunFam homeobox-leucine zipper protein ATHB-6-like 84 130 - -
Phac3g01021 319 Gene3D - 76 142 - -
Phac3g01021 319 ProSiteProfiles 'Homeobox' domain profile. 76 136 IPR001356 GO:0003677
Phac3g01021 319 Pfam Homeodomain 81 134 IPR001356 GO:0003677
Phac3g01021 319 CDD homeodomain 79 137 IPR001356 GO:0003677
Phac3g01021 319 MobiDBLite consensus disorder prediction 229 265 - -
Phac3g01021 319 MobiDBLite consensus disorder prediction 229 256 - -
Phac3g01021 319 PRINTS Lambda-repressor HTH signature 116 132 IPR000047 GO:0003677
Phac3g01021 319 PRINTS Lambda-repressor HTH signature 107 116 IPR000047 GO:0003677
Phac3g01021 319 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 69 241 IPR045224 GO:0003700
Phac3g01021 319 SUPERFAMILY Homeodomain-like 70 138 IPR009057 -
Phac3g01021 319 Coils Coil 149 176 - -
Phac3g01021 319 SMART HOX_1 78 140 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01021 Phac-Chr3 9714924 9717288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01021 42 268 Homeobox Transcription Factor Family AT3G01470 42.424 4.40e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac3g01021 Homeodomain 7.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01021 - K09338 gmx:100804328 495.352