Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01002 ATGGAGCTTGCATCTGTGAAATCTGAACTGAGCCCAAGAAGCCATAGGTTGCTGGTGATAGATGGTAGTGAGGTTATTGCTACCAAGTGTGTCAAAAGGAGGCGAAGAGGTTCGTCTATGTCAGTGTTAGGTGGCAATGAACAACAAGGTGAAAAGTTAGAAGAACATAAGCAACTTGGTACTGCCACCACTGTGAAGAGAAGTTCAAGGTTCAGGGGTGTTAGCAGACACAGGTGGACTGGAAGGTTTGAAGCACATCTATGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGTATATTTGGGAGCTTATAATGATGAAGAAGCAGCTGCTAGAGCTTATGATTTGGCTGCACTCAAGTACTGGGGAACATCAACTTTCACAAATTTTCCTGTATCTGATTATGACAAAGAAATTGAGATAATGAAAACAGTAACCAAAGAAGAATATCTTGCTTCACTGAGAAGGAGGAGCAGTGGTTTTTCCAGAGGTGTATCAAAGTATAGAGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGAATTGGGAGAGTGTTTGGCAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAAGCAGCTCGTGCATATGACATTGCAGCAATTGAGTACAGAGGCATAAATGCTGTGACAAACTTTGACTTGAGCACCTACATCAGATGGCTAAGACCAGGAACACATCCTATAGCTTCACATGATCAAAAGCCTAGCACAGACCCTCAACCCTTTGCTACCTCTAAATCAATGCAAACAAGAGGGAACATTGATGTATCCAACTCTAACATGCATTCATTCTCCTCAGCTGAATTGGACAGTACGAAGAAACAAGACTTTTCCAAGTATATAAACCCTCTGAGTCCTTGCAACAAACCATCTTCTCCAACAGCATTAGGACTTCTCCTAAAATCAACAGTGTTTAGAGAATTGATGCAGAGAAATCTGAACTCCTCTTGTGAGGAAGCTGAAGAAGTTGAATTGAAATACCCACAAGAAGGCAATGATGCAAATGGAGGGATTTATTATAGTGACAACACCAGTAACTCTTACTTTTGCTCTTCTCTTATCAACAGATTACCGAACCTGGAGTCACCAGAAGAGAGTTCATTGCCTGTGTATCATGGAACTGTGCAATCCGGATGGAGCAGTTCTTTCAACATGTCTAACTGA 1215 0.4214 MELASVKSELSPRSHRLLVIDGSEVIATKCVKRRRRGSSMSVLGGNEQQGEKLEEHKQLGTATTVKRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQKKKGKQVYLGAYNDEEAAARAYDLAALKYWGTSTFTNFPVSDYDKEIEIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGTHPIASHDQKPSTDPQPFATSKSMQTRGNIDVSNSNMHSFSSAELDSTKKQDFSKYINPLSPCNKPSSPTALGLLLKSTVFRELMQRNLNSSCEEAEEVELKYPQEGNDANGGIYYSDNTSNSYFCSSLINRLPNLESPEESSLPVYHGTVQSGWSSSFNMSN* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01002 404 ProSiteProfiles AP2/ERF domain profile. 172 230 IPR001471 GO:0003700|GO:0006355
Phac3g01002 404 SUPERFAMILY DNA-binding domain 69 138 IPR016177 GO:0003677
Phac3g01002 404 Coils Coil 323 343 - -
Phac3g01002 404 Pfam AP2 domain 69 128 IPR001471 GO:0003700|GO:0006355
Phac3g01002 404 Pfam AP2 domain 171 222 IPR001471 GO:0003700|GO:0006355
Phac3g01002 404 Gene3D AP2/ERF domain 171 232 IPR036955 GO:0003700|GO:0006355
Phac3g01002 404 Gene3D AP2/ERF domain 69 138 IPR036955 GO:0003700|GO:0006355
Phac3g01002 404 FunFam AP2-like ethylene-responsive transcription factor 171 232 - -
Phac3g01002 404 MobiDBLite consensus disorder prediction 244 287 - -
Phac3g01002 404 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 48 295 - -
Phac3g01002 404 ProSiteProfiles AP2/ERF domain profile. 70 136 IPR001471 GO:0003700|GO:0006355
Phac3g01002 404 FunFam AP2-like ethylene-responsive transcription factor 69 138 - -
Phac3g01002 404 MobiDBLite consensus disorder prediction 247 287 - -
Phac3g01002 404 SMART rav1_2 70 142 IPR001471 GO:0003700|GO:0006355
Phac3g01002 404 SMART rav1_2 172 236 IPR001471 GO:0003700|GO:0006355
Phac3g01002 404 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Phac3g01002 404 PRINTS Ethylene responsive element binding protein signature 212 232 IPR001471 GO:0003700|GO:0006355
Phac3g01002 404 MobiDBLite consensus disorder prediction 37 62 - -
Phac3g01002 404 SUPERFAMILY DNA-binding domain 171 232 IPR016177 GO:0003677
Phac3g01002 404 CDD AP2 171 232 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01002 Phac-Chr3 9460266 9462716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01002 66 286 AP2-EREBP Transcription Factor Family AT5G57390 58.108 2.36e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Phac3g01002 AP2 5.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01002 - - gmx:100798483 722.235