Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01000 ATGTCGAACTTGCAGTTTCAACTACACTCTCAACCATCAATCTTATCGTCTTTATCTTCATTATCCTCGTCTTCTCCTAAGCTATTCGCAAACCAATCTTTCTCTCCAAAGTCTCTTCCTTTTAACCCTCCTAAACCCTTCTCCCTAAGATGTCGCCACTCTGACCTCTTCGACCAGAACACCTTAGCCTCATCACAACGACCCACAAGACCCACTGCTTCAGCTTTGCCGCCTAGGGTTTATGTTGGTTACTCCATTTACAAAGGGAAGGCGGCGCTTACTTTGACTCCTAGGCCACCGGAATTCGTACCGCTCGATTCAGGGGCATATAAAATATCGAAGGAAGGTTATGTGCTGCTTCAGTTTGCACCTGCTGTTGGTACACGCCAATATGACTGGAATAGGAAGCAGGTGTTTTCCTTATCAGTGGGGGAAATGGGAAGTGTAATAAGCCTTGGTACAAGGGAGTGCTTAGACTTTTTTCATGACCCTTTTAAGGGCAAAAGCGATGAAGGCAAAGTCAGGAAAATTTTGAAGCTGGAACCTCTTCCAGATGGTTCTGGGCACTTATTTAACCTAAGTGTTCAAAACAAGCTTGTAAACGTGGATGAAAACATCTGCATCCCTATTACAAAAGCAGAGTTAGCAGTTTTGAGCTCAACTTTCAATTTTATCTTGCCATACCTTCTTGGTTGGCATACCTTTGCAAACTCCATAAAGCCAGAAGATACTAGCGGAGGGAATAATGCCAACCCAAGATATGGAGGTGACTATGAATGGAACAGATAG 789 0.4385 MSNLQFQLHSQPSILSSLSSLSSSSPKLFANQSFSPKSLPFNPPKPFSLRCRHSDLFDQNTLASSQRPTRPTASALPPRVYVGYSIYKGKAALTLTPRPPEFVPLDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRECLDFFHDPFKGKSDEGKVRKILKLEPLPDGSGHLFNLSVQNKLVNVDENICIPITKAELAVLSSTFNFILPYLLGWHTFANSIKPEDTSGGNNANPRYGGDYEWNR* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01000 262 Gene3D Transcriptional Coactivator Pc4; Chain A 73 249 IPR009044 GO:0003677|GO:0006355
Phac3g01000 262 SUPERFAMILY ssDNA-binding transcriptional regulator domain 78 262 IPR009044 GO:0003677|GO:0006355
Phac3g01000 262 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 71 246 - -
Phac3g01000 262 MobiDBLite consensus disorder prediction 241 262 - -
Phac3g01000 262 Pfam Whirly transcription factor 86 220 IPR013742 GO:0003697|GO:0006355|GO:0006952
Phac3g01000 262 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 27 262 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01000 Phac-Chr3 9437810 9440993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01000 45 262 Whirly Transcription Factor Family AT1G14410 70.183 1.18e-114 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Phac3g01000 Whirly 3.7e-57 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01000 K26559 - gmx:100789252 424.476