Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00999 ATGTCGAACTTGCAGTTTCAACTACACTCTCAACCATCAATCTTATCGTCTTTATCTTCATTATCCTCGTCTTCTCCTAAGCTATTCGCAAACCAATCTTTCTCTCCAAAGTCTCTTCCTTTTAACCCTCCTAAACCCTTCTCCCTAAGATGTCGCCACTCTGACCTCTTCGACCAGAACACCTTAGCCTCATCACAACGACCCACAAGACCCACTGCTTCAGTTGGAGCTTTGCCGCCTAGGGTTTATGTTGGTTACTCCATTTACAAAGGGAAGGCGGCGCTTACTTTGACTCCTAGGCCACCGGAATTCGTACCGCTCGATTCAGGGGCATATAAAATATCGAAGGAAGGTTATGTGCTGCTTCAGTTTGCACCTGCTGTTGGTACACGCCAATATGACTGGAATAGGAAGCAGGTGTTTTCCTTATCAGTGGGGGAAATGGGAAGTGTAATAAGCCTTGGTACAAGGGAGTGCTTAGACTTTTTTCATGACCCTTTTAAGGGCAAAAGCGATGAAGGCAAAGTCAGGAAAATTTTGAAGCTGGAACCTCTTCCAGATGGTTCTGGGCACTTATTTAACCTAAGTGTTCAAAACAAGCTTGTAAACGTGGATGAAAACATCTGCATCCCTATTACAAAAGCAGAGTTAGCAGTTTTGAGCTCAACTTTCAATTTTATCTTGCCATACCTTCTTGGTTGGCATACCTTTGCAAACTCCATAAAGCCAGAAGATACTAGCGGAGGGAATAATGCCAACCCAAGATATGGAGGTGACTATGAATGGAACAGATAG 795 0.439 MSNLQFQLHSQPSILSSLSSLSSSSPKLFANQSFSPKSLPFNPPKPFSLRCRHSDLFDQNTLASSQRPTRPTASVGALPPRVYVGYSIYKGKAALTLTPRPPEFVPLDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRECLDFFHDPFKGKSDEGKVRKILKLEPLPDGSGHLFNLSVQNKLVNVDENICIPITKAELAVLSSTFNFILPYLLGWHTFANSIKPEDTSGGNNANPRYGGDYEWNR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00999 264 FunFam Single-stranded DNA-binding protein WHY2, mitochondrial 73 248 - -
Phac3g00999 264 SUPERFAMILY ssDNA-binding transcriptional regulator domain 80 264 IPR009044 GO:0003677|GO:0006355
Phac3g00999 264 Gene3D Transcriptional Coactivator Pc4; Chain A 72 245 IPR009044 GO:0003677|GO:0006355
Phac3g00999 264 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 38 264 IPR013742 GO:0003697|GO:0006355|GO:0006952
Phac3g00999 264 MobiDBLite consensus disorder prediction 243 264 - -
Phac3g00999 264 Pfam Whirly transcription factor 88 222 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00999 Phac-Chr3 9437810 9440993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00999 45 264 Whirly Transcription Factor Family AT1G14410 69.091 1.62e-113 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Phac3g00999 Whirly 3.8e-57 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00999 K26559 - gmx:100789252 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g00999 3 9437810 9440993 Phac3g00999 3 9437810 9440993 ECH