Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00984 ATGATGCCGCAAGATATGAAGCAGCACCATAATGAAGAGTCCACGAAGAAGGAGCACGGTGAAGAATCTAAACAGAAGGAGCACGGTGAAGAATCTAAAAAGAAGGAGCACAACGAGGAATCTAAAAAGAAGGAGCGTCACATTGTGACTTGGACTCAAGAGGAGGATGATATACTAAGGGAGAGGATTGGTATTCATGGAACTGAAAATTGGGCAATTATTGCATCTAAGTTTAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACGTACTTGAATTCTGATTTCAAGAAAGGTGGATGGTCAGCTGAGGAAGACATGCTCTTATGTGAGGCTCAAAAAATATTTGGTAACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGGACGGATAATGCTGTGAAAAACCGTTTCTCCACACTCTGCAGAAAGAAAGAAAAATATGCAGCATTAGCAAAAGAGAACAGCACATCATACATCAATTCAAATAACAAGAGAATTATGTTTGAACATTATAATAATATGGATACAACAGCTGAATCTGGAGGACCTATTAAAAAGATGAGGAGGGCCCATATCCCTGATGATGCAGAAAAAATAAAATTTGGGGACCGATCACATTTAGGAAATGGAGCTCCAATAAATCTACAGCAAAGAGCACCATTTGCAGTATTAGCTCAAAACTCCAATAATTCAAACAGCTTGCCAGACCAGCAGCATGTTTGCAATCCCAAGCTTAATTCTGCCCAAGATAACCAGATTCAAGGAACATTTCTCAAAAGGGATGACCCAAAGAGAAGTGTATTGATGGAACAGGCAGAGTTACTAAGTTCACTAGCTCTAAAAGTTGATACCGAAAACATGGACCAAAGTCTTGAACACACTTGGAAGGTTCTTCAAGAGTTTCTGAACCTAAACAAAGAATCAGATATTCCTGGTCACAAGATTCCAGATTTACGGCTAGTAGATAAAGATATCACTAAGGACTTGAAGAGCGGTAATGAGGAAGGCCAGGCTTGTTGGAGGCAAGTGGAACAGTACGACTCTCCAAGCAGTTCTGGATACAGCACAGAATCAACTTTCCTTTGTCAGTCAGCCGGTGATAATTCAGAGCACCCATTGCATCAGGATATTGGAACTGAAATGAAGTCTGAACAACTTGGAGATGAAAAAGGAGAAGGCAGAGATGAGAAAGGGGTTCTTTGTACTGCAAATGTGTCTCAAGATATGTTGCCATATTGTGAGGAACAGATAAACAATGACGGGATTGTTTCTACCTCATCAAGATTGGAGTTCAGCTCCCCTATTCAAGTAACCCCTCTGTTCAGATCCTTGGCAGCAGGAATTCCCAGCCCACAATTTTCCGAAAGTGAAAGGAACTTCTTAAGGAAAACACTAGGAGTGGAATCTCCATCCATCAACCCAAGTGCCAACTCATCACAACCGCCACCCTGCAAAAGAGCCCTACTACCAAGTCTATAA 1491 0.4131 MMPQDMKQHHNEESTKKEHGEESKQKEHGEESKKKEHNEESKKKERHIVTWTQEEDDILRERIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSAEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCRKKEKYAALAKENSTSYINSNNKRIMFEHYNNMDTTAESGGPIKKMRRAHIPDDAEKIKFGDRSHLGNGAPINLQQRAPFAVLAQNSNNSNSLPDQQHVCNPKLNSAQDNQIQGTFLKRDDPKRSVLMEQAELLSSLALKVDTENMDQSLEHTWKVLQEFLNLNKESDIPGHKIPDLRLVDKDITKDLKSGNEEGQACWRQVEQYDSPSSSGYSTESTFLCQSAGDNSEHPLHQDIGTEMKSEQLGDEKGEGRDEKGVLCTANVSQDMLPYCEEQINNDGIVSTSSRLEFSSPIQVTPLFRSLAAGIPSPQFSESERNFLRKTLGVESPSINPSANSSQPPPCKRALLPSL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00984 496 MobiDBLite consensus disorder prediction 472 496 - -
Phac3g00984 496 Pfam Myb-like DNA-binding domain 51 111 - -
Phac3g00984 496 SMART sant 99 147 IPR001005 -
Phac3g00984 496 SMART sant 47 96 IPR001005 -
Phac3g00984 496 MobiDBLite consensus disorder prediction 1 47 - -
Phac3g00984 496 FunFam Transcription factor MYB124 43 99 - -
Phac3g00984 496 SUPERFAMILY Homeodomain-like 47 141 IPR009057 -
Phac3g00984 496 CDD SANT 50 94 IPR001005 -
Phac3g00984 496 CDD SANT 103 144 IPR001005 -
Phac3g00984 496 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Phac3g00984 496 MobiDBLite consensus disorder prediction 472 488 - -
Phac3g00984 496 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Phac3g00984 496 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 94 IPR017930 -
Phac3g00984 496 Gene3D - 38 99 - -
Phac3g00984 496 Gene3D - 102 174 - -
Phac3g00984 496 PANTHER MYB PROTEIN-RELATED 50 221 - -
Phac3g00984 496 ProSiteProfiles Myb-like domain profile. 51 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00984 Phac-Chr3 9250770 9257440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00984 37 345 MYB Transcription Factor Family AT2G02820 58.917 2.21e-129 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g00984 Myb_DNA-bind_6 6.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00984 K09422 - gmx:100807667 664.455