Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00946 ATGGAAGAAGCACTGCGTCGTCTCAACGGAGTCACACCCTCTCAAGAACCTGACCTCGTTTCAGACCCTCACCCGAAGAAGTGTGCCGCTAAGCGCACCTTGCGTGACACCGCCAACTCCGGCACCGCCATGCGCTACCGTGGAGTTCGCCGCCGTCCCTGGGGCCGCTATGCTGCCGAGATCCGCGACCCGCAATCTAAGGAGCGCCGCTGGCTCGGCACCTTTGACACCGCCGAGGAGGCTGCCTGTGCCTACGATTGCGCCGCCCGAGCCATGCGCGGTGTCAAGGCCCGCACCAACTTCGTGTACCCTGACGCTGCCGATCCCCACCTCTTCCATCCCTTCAATCTCCCCAAGCACTGCCACGTCAGCAGGTTTCCCCATAACACGAACTTGGGGAGTGATTTTCCTGCAAGTTCCCACCATAGCGCTTCTTCTTCTTCTTCGTCTCTCAACATGCTTCTCTTTCGTGACTTCCTTAATTCTTCTTCTAACCCGTGTCTGCTTTCTGCTGCTTCTCCTCAGCAGTTTCATAATAACAAAGCTGCTAGCTGTTATGTAAACTCTTCATCTCCGTCTCTATCTTCTTCTACTGCTACTAACTGTCTCCAAGGTTGTTGTGTCGGCAACGCTAATAGCTACAACAACGCTGTTAGTGCCAATCATGGAGCTGAAGTAGCTGAAGTTATCGATGAGGACTCCGACTTTTTCCTGCGTGAGTCTTCGGATTCTGGGCTGTTGGAAGAGATAGTTCATAAGTTCTTGCCAAAGTCGAAGCCTAAAGTGGAGACTTCGACTGTGGCTCAGTCTTTTCCTGAGTCGGTTCCTCAACCGATATTTGATCATGTGGTTGTTTCTGCTAGCAAGGGTTATGCTGATTCCAGAATGAGGGTTCCCAAGGTTGAAGGTTTTGGTGTCTGTTATGATTCTCCCATGCAGCAATTTGAAGCTCTTAGTGGTTTTAATGCCATGCAGGGTATGAGCTCTATCCAGAGAGATAACCAGTTTATGATGAATCATATTGCAGGATTCTCCGGCATTGAAGATTATCTTCAGTATCCTGAGCTTCTTAATTCCTTTGCGACCAGGATGTAA 1095 0.5078 MEEALRRLNGVTPSQEPDLVSDPHPKKCAAKRTLRDTANSGTAMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDCAARAMRGVKARTNFVYPDAADPHLFHPFNLPKHCHVSRFPHNTNLGSDFPASSHHSASSSSSSLNMLLFRDFLNSSSNPCLLSAASPQQFHNNKAASCYVNSSSPSLSSSTATNCLQGCCVGNANSYNNAVSANHGAEVAEVIDEDSDFFLRESSDSGLLEEIVHKFLPKSKPKVETSTVAQSFPESVPQPIFDHVVVSASKGYADSRMRVPKVEGFGVCYDSPMQQFEALSGFNAMQGMSSIQRDNQFMMNHIAGFSGIEDYLQYPELLNSFATRM* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00946 364 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Phac3g00946 364 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Phac3g00946 364 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Phac3g00946 364 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Phac3g00946 364 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Phac3g00946 364 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Phac3g00946 364 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Phac3g00946 364 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Phac3g00946 364 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 200 - -
Phac3g00946 364 MobiDBLite consensus disorder prediction 1 41 - -
Phac3g00946 364 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00946 Phac-Chr3 8675386 8676570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00946 1 325 AP2-EREBP Transcription Factor Family AT1G24590 35.860 1.06e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac3g00946 AP2 6.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00946 - - gmx:102661952 433.721