Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00916 ATGATTCCTTCTTCTGTTTCCTTCCTGCTCCTCTTCCTTTCCGTGTTCGCACCTTTAACTCTTTCCGATCCAAGAGCGCAGAGAGCCGCTCTGCTATGCACCAACCGCTCAGTTTCGTCCCTTTCTCGGCGCCAAGTTTTCATCTCAAACTTTCTGGAGGCGATGGACGCCTTGACCCCTCTGACGACGACTCGGCAGCACGGCGCCGTGGTGAAGGGGTCAGGAAACGTCACCGTTTACGCCATGGGTGAGTGCATGAAGGACCTCTCGCAGTCGGACTGCAATGTGTGCCTGGCGCAGTGCAAGACGCAGCTCCTCGCGTGCCTCCCGTTCCAGAAAGGAACACAGGGTGGTAGGTTGTTCTTCGACGGCTGCTACCTCCGCTACGACGACTATAACTTCTTCGCCGAGAGCTTCGGCGACCAAGACACCACTGTGTGCGGCACCAATGTAAGTAGTAACAATAGTAATAATATTAGTGATGGTGCTCACAGTAGTGGTATTTATAAGGCCAACGCTTTGGAGTTGGTTAGGAACCTGAGCGAGGTGGCGCCCAAAAACGATGGGTTTTGGGTGGGGGCGGTGGAGAGAAAGAACGTGAGTGTTTATGGGTTGGCTCAGTGCTGGGAGTTTGTGAACGGTAGTGCCTGCAAGAAATGTTTGGCGGATGCTGCTACGAGGATTGCTTCGTGTGCAACACAAGAAGGGAGGGCGTTGAATGCTGGTTGTTACTTGAGGTTCTCTGCGCACAAGTTTTATAACAATTCAACGGATGTTGCAATTTCTGGAAATCATGGACAACGGAGTCTATCTAAAATTCTGGCTGCGACCACTGGTGCCCTGGCTCTTGTGCTGGTTGTTGCAACAGTTGTTTTCTTTATAAGGAAGAACATGGTGACAAGGAGAAGAGAAAGAAGACAGTTTGGTGCTCTTCTTGACCAAGTGAATAAGTCCAGGCTAAATATGCCATATGAGATTCTTGAAAAGGCAACAGATTACTTCAATGATTCCAACAAGCTAGGACAAGGGGGGTCAGGTTCTGTTTATAAAGGAGTTATGCCAGATGGAATTACTGTTGCCATAAAAAGACTAAGATTTAACACAACACAATGGGTGGATCATTTCTTCAATGAGGTCAATTTGATAAGTGACATCCAACACAAAAATCTGGTAAAACTATTAGGATGCAGTATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAACCAGAGCCTCCATGATCACCTTTCTGTCAGAAGGATCTCTCAACCGCTGAGTTGGGAATTCAGGCATAAGATTATCTTAGGAATTGCAGAGGGCTTGGCCTACCTTCACGAGGAATCACATCTTAGAATCATTCATAGAGACATAAAATTGAGCAATATTCTACTTGAGGAGGACTTCACACCAAAGATTGCAGATTTTGGACTTGCTAGATTATTTCCAGAAGATAGGTCTCACATTAGCACAGTCATTGCTGGTACTCTGGGGTATATGGCTCCAGAGTACGTCATTCGTGGGAAGTTGTCTGAGAAAGCAGATGTTTACAGTTTTGGAGTTCTGGTTATCGAAATTGTCTCTGGCAAAAGAAACAGTTCCTTTATTATGAATTCATCCTCTCTCCTACAAACGGTAACTGTTTTCATCTGGAATTCATTTAATGTTTTTTAA 1680 0.4583 MIPSSVSFLLLFLSVFAPLTLSDPRAQRAALLCTNRSVSSLSRRQVFISNFLEAMDALTPLTTTRQHGAVVKGSGNVTVYAMGECMKDLSQSDCNVCLAQCKTQLLACLPFQKGTQGGRLFFDGCYLRYDDYNFFAESFGDQDTTVCGTNVSSNNSNNISDGAHSSGIYKANALELVRNLSEVAPKNDGFWVGAVERKNVSVYGLAQCWEFVNGSACKKCLADAATRIASCATQEGRALNAGCYLRFSAHKFYNNSTDVAISGNHGQRSLSKILAATTGALALVLVVATVVFFIRKNMVTRRRERRQFGALLDQVNKSRLNMPYEILEKATDYFNDSNKLGQGGSGSVYKGVMPDGITVAIKRLRFNTTQWVDHFFNEVNLISDIQHKNLVKLLGCSITGPESLLVYEYVPNQSLHDHLSVRRISQPLSWEFRHKIILGIAEGLAYLHEESHLRIIHRDIKLSNILLEEDFTPKIADFGLARLFPEDRSHISTVIAGTLGYMAPEYVIRGKLSEKADVYSFGVLVIEIVSGKRNSSFIMNSSSLLQTVTVFIWNSFNVF* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00916 559 FunFam Cysteine-rich receptor-like protein kinase 2 26 134 - -
Phac3g00916 559 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 80 548 - -
Phac3g00916 559 FunFam Cysteine-rich receptor-like protein kinase 3 143 252 - -
Phac3g00916 559 ProSiteProfiles Protein kinase domain profile. 334 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00916 559 SUPERFAMILY Protein kinase-like (PK-like) 318 540 IPR011009 -
Phac3g00916 559 Gene3D Transferase(Phosphotransferase) domain 1 410 555 - -
Phac3g00916 559 FunFam Cysteine-rich receptor-like protein kinase 2 300 409 - -
Phac3g00916 559 ProSiteProfiles Gnk2-homologous domain profile. 150 252 IPR002902 -
Phac3g00916 559 Pfam Salt stress response/antifungal 33 132 IPR002902 -
Phac3g00916 559 Pfam Salt stress response/antifungal 164 249 IPR002902 -
Phac3g00916 559 ProSiteProfiles Gnk2-homologous domain profile. 26 134 IPR002902 -
Phac3g00916 559 Pfam Protein kinase domain 335 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00916 559 SMART serkin_6 334 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00916 559 FunFam Lectin-domain containing receptor kinase A4.3 410 558 - -
Phac3g00916 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Phac3g00916 559 Gene3D Phosphorylase Kinase; domain 1 294 409 - -
Phac3g00916 559 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Phac3g00916 559 Gene3D - 148 252 IPR038408 -
Phac3g00916 559 Gene3D - 27 134 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00916 Phac-Chr3 8172093 8176180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00916 20 499 Receptor kinase-like Gene Family AT1G70530 59.459 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac3g00916 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00916 - - gmx:100787359 875.93