Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00914 ATGGAAGACGAAATGTACGGCATGCCATCACCGGCGGAGTACTCGGAGAAAGCGTTGATGACGCCGGACAACATATTTCCGGCTGAGTACCACGGCTTCCTAATGTCCTCCGCTAGCCGGATTCCGATGTTCGGATCCGACGAGTTGCTCTCCGCCGCCGTCGCCATCACCGCCGGCCTTAGAACTGAACCCTACCCGAGCGTCGCCATCGCACCCGAAATTCAGCGCCACCACGACACCTCTTCCCTCATCAAAGCCAAAATCGCTTCTCACCCTCACTACCCTCGCCTCCTCCAAGCCTACATCGATTGCCAGAAGGTGGGAGCGCCTCCAGAAATCGCGTGTTTGTTAGAGGAAATCCGACGAGAAAACGACGTTTGCAAGAGGGACGTTGTTTACACGTGCGTTGGAGCCGATCCCGAACTCGACGAGTTCATGGAAACCTACTGTGACATGCTGGTGAAATACAAGTCCGATCTGACGCGGCCTTTTGACGAAGCCACCACCTTCCTCAACAAGATCGAAACGCAGCTTACGGATCTCTGCACTGGTTCTTCTCTTCCAACCCTTTCCGATGACGGAGGTGTATCTTCTGAAGAAGGATTAAGTGCCGGAGATGGTGATTTTCAAGATGAACAATTGCATAATGAAGACAGAGAGTTGAAGGATAAACTTTTACGTAAGTTTGGAAGTCATATTGGTTCACTAAAATTAGAATTTTCAAAGAAAAAAAAGAGGGGTAAACTGCCAAAAGATGCTAGACAAATGCTACTGCAGTGGTGGAATATTCACTACAAATGGCCTTATCCTACGGAAAGTGATAAGATTGCACTGGCTAAATCAACTGGGTTAGACCAAAAGCAAATTAACAATTGGTTCATTAATCAAAGAAAGCGTCACTGGAAGCCATCGGAGAATATGCCATTTGCTATGGTGGATGGTCTTACTGGTCGGTTCCTTACTGATGAGTGA 972 0.4835 MEDEMYGMPSPAEYSEKALMTPDNIFPAEYHGFLMSSASRIPMFGSDELLSAAVAITAGLRTEPYPSVAIAPEIQRHHDTSSLIKAKIASHPHYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDVCKRDVVYTCVGADPELDEFMETYCDMLVKYKSDLTRPFDEATTFLNKIETQLTDLCTGSSLPTLSDDGGVSSEEGLSAGDGDFQDEQLHNEDRELKDKLLRKFGSHIGSLKLEFSKKKKRGKLPKDARQMLLQWWNIHYKWPYPTESDKIALAKSTGLDQKQINNWFINQRKRHWKPSENMPFAMVDGLTGRFLTDE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00914 323 Pfam KNOX1 domain 84 125 IPR005540 GO:0003677|GO:0005634
Phac3g00914 323 SUPERFAMILY Homeodomain-like 241 314 IPR009057 -
Phac3g00914 323 SMART ELK_2 220 241 IPR005539 GO:0003677
Phac3g00914 323 Pfam Homeobox KN domain 260 299 IPR008422 GO:0003677|GO:0006355
Phac3g00914 323 SMART KNOX1_2 82 126 IPR005540 GO:0003677|GO:0005634
Phac3g00914 323 ProSiteProfiles 'Homeobox' domain profile. 240 303 IPR001356 GO:0003677
Phac3g00914 323 SMART KNOX2_2 132 183 IPR005541 GO:0003677|GO:0005634
Phac3g00914 323 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 86 310 - -
Phac3g00914 323 CDD homeodomain 252 304 IPR001356 GO:0003677
Phac3g00914 323 Pfam KNOX2 domain 135 182 IPR005541 GO:0003677|GO:0005634
Phac3g00914 323 Gene3D - 239 309 - -
Phac3g00914 323 SMART HOX_1 242 307 IPR001356 GO:0003677
Phac3g00914 323 Pfam ELK domain 220 241 IPR005539 GO:0003677
Phac3g00914 323 ProSiteProfiles ELK domain profile. 220 240 IPR005539 GO:0003677
Phac3g00914 323 ProSitePatterns 'Homeobox' domain signature. 278 301 IPR017970 GO:0000981|GO:0006355
Phac3g00914 323 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00914 Phac-Chr3 8144392 8153080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00914 3 323 Homeobox Transcription Factor Family AT1G23380 66.168 9.34e-144 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Phac3g00914 KNOX2 6.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00914 - - gmx:100786454 587.415