Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00877 ATGCTGTCATATCTACTGCCATCGCGAAATGATAATTCTTCCCCATCACCACGTAAAAATTCGCCACCACCATCACCACAGTTCCATGTTCCACCTCCCCTTGATAAACCTTCTACGAATAGTTTGCGTGATGCAGTCTCCAATGACTCAACAACGGGAAGCTCTTGGAACTCACAAGCAACAGAATCAAGCCCCCAGGTCAAGCGTGGCGTTGTTTCCCAAGCAAACTCAACGGTTTCTCCTCCCGCCCCCGGTGATAATTCAGAAAAATATGTTGCCTTTGCAGTCGCCGGACTTTTAGCTTTTGCCTTGATTGCTGTAGCTGTAGCTGTAGCCTTTGCTTTGGTGTTTAAGAGGAAGAAACCAAGAGATGATGCTAATGGTGCACCCTACATGCCACCCCTTAATATTCAAGTCAAATCAGGTGCTAATGGGCATTACTATGAACAGCAGCCTTCCCTTGCAAACACCATTGGAAATGGGAATGCGAACGTGAAGCATTTTGGATCTCCTTTAAACTCACCCCAGCTCAAAAGTGCTCCGATAGTTTTCACCTATGAAACGGTTATGGAAATAACAAACGCATTTTCTAGTCAAAATGTTATAGGGGAAGGAGGATTTGGGTTTGTTTACAAAGGTTTGCTGCCAGATGGAACAGGAGTTGCAGTAAAGCAGCTTAGGGCTGGCAGTGGGCAGGGAGAAAGGGAATTCAAGGCTGAAGTGGAGATCATTAGCCGAGTACATCATCGATATTTGGTGTCATTAGTTGGTTATTGCGTATCTGAACAGCAAAGAATCCTTATCTATGAGTATGTTCCTAATGGAACACTTCATCATCACTTGCATGGAAGGGCAATGCCAGTGTTGGATTGGTGCAAAAGGCTAAAGATTGCAATAGGCGCTGCAAAGGGCCTGGCATATCTTCACGAGGACTGCAGCCAAAAGATAATTCACCGAGATATTAAGTCAGCAAACATACTCTTGGATGATGCTTTTGAGGCAAAGGTTGCAGACTTTGGGCTTGCTAGATTATCTGATGCTGCCAATACCCATGTATCAACTAGGGTTATGGGGACCTTTGGGTACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGACAGATCAGATGTTTACTCATTTGGGGTTGTCCTCCTTGAGCTTGTTACGGGAAGGAAACCCGTTGATCAAACTCAGCCAATTGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCATTCGTGCATTGGAGACACGTAATTTTAGTGAACTGGTAGATCCAAGACTCGAAAAACAGTTTGTGGAGAGTGAAATGTCCAGAATGGTTGAGGCAGCTGCAGCTTGTGTTCGCCACTCAGCTCCTAAACGGCCTCGTATGGTTCAGGTGGTAAGAGCCTTGGATACTGTTGATGAAAGTTCTGATCTATCTAACGGGGTGAAATATGGTCAGAGCACAAATTATGATTCTGGCCAGTATGATAAAGAAATAATGCTATTCAAAAGGTTGGCAAATGGCACCTTTGTTGATTCTGATTTTGATAGTAGAGAATACAGTCTTTCAAGACAGACCTCGAGAGGATCCCAACAAGAATTGATTCGGTATAGTTCTAGTGGCGAGTCAGAACCTAGAGCATAG 1644 0.4446 MLSYLLPSRNDNSSPSPRKNSPPPSPQFHVPPPLDKPSTNSLRDAVSNDSTTGSSWNSQATESSPQVKRGVVSQANSTVSPPAPGDNSEKYVAFAVAGLLAFALIAVAVAVAFALVFKRKKPRDDANGAPYMPPLNIQVKSGANGHYYEQQPSLANTIGNGNANVKHFGSPLNSPQLKSAPIVFTYETVMEITNAFSSQNVIGEGGFGFVYKGLLPDGTGVAVKQLRAGSGQGEREFKAEVEIISRVHHRYLVSLVGYCVSEQQRILIYEYVPNGTLHHHLHGRAMPVLDWCKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDDAFEAKVADFGLARLSDAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVYSFGVVLLELVTGRKPVDQTQPIGDESLVEWARPLLIRALETRNFSELVDPRLEKQFVESEMSRMVEAAAACVRHSAPKRPRMVQVVRALDTVDESSDLSNGVKYGQSTNYDSGQYDKEIMLFKRLANGTFVDSDFDSREYSLSRQTSRGSQQELIRYSSSGESEPRA* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00877 547 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 105 505 IPR047117 -
Phac3g00877 547 Pfam Protein tyrosine and serine/threonine kinase 199 469 IPR001245 GO:0004672|GO:0006468
Phac3g00877 547 MobiDBLite consensus disorder prediction 521 539 - -
Phac3g00877 547 MobiDBLite consensus disorder prediction 40 84 - -
Phac3g00877 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Phac3g00877 547 MobiDBLite consensus disorder prediction 1 86 - -
Phac3g00877 547 Gene3D Phosphorylase Kinase; domain 1 162 271 - -
Phac3g00877 547 MobiDBLite consensus disorder prediction 1 16 - -
Phac3g00877 547 MobiDBLite consensus disorder prediction 521 547 - -
Phac3g00877 547 SUPERFAMILY Protein kinase-like (PK-like) 171 469 IPR011009 -
Phac3g00877 547 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Phac3g00877 547 ProSiteProfiles Protein kinase domain profile. 196 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00877 547 FunFam Proline-rich receptor-like protein kinase PERK8 170 271 - -
Phac3g00877 547 FunFam proline-rich receptor-like protein kinase PERK8 272 484 - -
Phac3g00877 547 SMART serkin_6 196 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00877 547 MobiDBLite consensus disorder prediction 17 33 - -
Phac3g00877 547 Gene3D Transferase(Phosphotransferase) domain 1 272 491 - -
Phac3g00877 547 CDD STKc_IRAK 202 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00877 Phac-Chr3 7777070 7782225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00877 69 536 Trihelix Transcription Factor Family AT1G70460 59.470 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phac3g00877 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00877 - - pvu:PHAVU_003G060600g 984.556