Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00851 ATGGTTTACTCCTTCTATGACAAAAGCTCTTCTTCTGGCTCTGATACTTCGGGCTTGTTCAATCCCACTTTGCGAAGCCTTGGAGCTTCCAATGGTGATGTTGTGAAGGGTGGCTTGTCATCATCGCATTCTTTGGTTTATGAGAGTGAGAAGGGAGAGCTGGTGAAGTGTTCTTCGGCTGCAAGGGTAGGGAAGAATGAGATTTGTGAGGCCAAAGCTTTGGCTGCTTTGAAGAATCATAGTGAAGCAGAGAGGAGAAGGAGGGAGAGAATAAACGGTCATCTTACAACACTTCGTGGCCTTGTACCATCCACTGAAAAGATGGATAAAGCCACTTTACTGGCTGAAGTGATCAGCCAAGTGAAGGAATTGAAGAAAACAGCAGTAGAAGCAAGCAAGGGTTTTCTAATCCCAATGGATGCTGATGAAGTGAAAGTTGAACCATGTGATGGATCCAAGTCTTACAGTGCAACTATTTGCTGTGATTTCCGCCCTGAAATAATATCTGACCTAAGACAAACACTTGATTCCCTTCCACTGCATCTAGAGAAGGCAGAAATTTCAACTTTGGCAGGAAGAATGAAGAATGTATTCGTCTTTACATGCTGCAAAGGGAACATTAATATTGATACTGAAGAATGCCAAACTCTTGCAAGAACTGTTCACCAGGCACTATCTTCTGTACTGGATAAGGCTTCTGCTTCACTTGAGTTCTCACCCAGAACATCACATGCTAACAAGAGGAGAAGACTATGCTTTATTGAAACATCCACTTCCTCATGCAACCATGGATCTTGTTTGTGTTGA 807 0.43 MVYSFYDKSSSSGSDTSGLFNPTLRSLGASNGDVVKGGLSSSHSLVYESEKGELVKCSSAARVGKNEICEAKALAALKNHSEAERRRRERINGHLTTLRGLVPSTEKMDKATLLAEVISQVKELKKTAVEASKGFLIPMDADEVKVEPCDGSKSYSATICCDFRPEIISDLRQTLDSLPLHLEKAEISTLAGRMKNVFVFTCCKGNINIDTEECQTLARTVHQALSSVLDKASASLEFSPRTSHANKRRRLCFIETSTSSCNHGSCLC* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00851 268 SMART finulus 81 130 IPR011598 GO:0046983
Phac3g00851 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 79 127 IPR036638 GO:0046983
Phac3g00851 268 Pfam Helix-loop-helix DNA-binding domain 79 124 IPR011598 GO:0046983
Phac3g00851 268 Gene3D - 72 133 IPR036638 GO:0046983
Phac3g00851 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 124 IPR011598 GO:0046983
Phac3g00851 268 PANTHER TRANSCRIPTION FACTOR BHLH30 39 255 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00851 Phac-Chr3 7476083 7480066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00851 24 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.426 7.92e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g00851 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00851 - - gmx:100804756 434.491