Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00835 ATGAATTTGCCATCAACTATTTGCCTCTCTTATTTACTCCTTACCTTTCTTCTCATTACGTATTACCAAGTTGAGGCTACAGATGGAGACAACCAAGTCATATCTATAGGTGCAATAATTGATGTCAACTCCCGCATTGGGAAAGAACAGCGTGTAGCCATGGACCTTGCAGCTCAAACTTACAATACCACTTCCAACACCTACAAGCTTGCTCTTCATTTTCAGCAACCCATCAAAGATCCCTTCAGACCCACTTCCCTTGCTAGAAGAATGATTATGAGACAGAAGATGCAAGTGATTATAGGGATGCACACATGGAAAGAAGCAGCTTCAGTAGCTGAATTAGTACGCAAATCTCAAGTTCCTGTCATATCCTTTGCAGCTCCTAGCATTAGCCCATCATTGATGCCAATTCGGTGGCCTTCCTTGGTAAGAATGGCTAACAATGGTACTGCGTATGCAAAATGTGTTGCAGATATGGTACATGCTTATAGTTGGCAGAGAGTAGTAGTCATTTATGAAGATGGAGATTATGAGATGCTAGCCTTGCTATCTGAGACCCTCCAAGATGTTGGTTCACTGATCGAGTACCGTTTGGCTCTTCCATCTCTTTCTTATCTTTCTAATCCTGGAGAGTTCATTCGCGAAGAGCTGTTTAAGGTGATTGAAAATACACAGTCCCGGGTGTTCATTGTTCTGCAATCATCGTTAGAAATGGTGATTCAGTTGTTCAGAGAAGCTTCTCAAATGGGACTTGTGGATGGAGAATCAGCTTGGATAATCCCAGAGAGCATAACTAATTTGCTTGATTCTGTCAACAAGTCTGCTATTTCCTACATGGAAGGAGCTTTAGGAATCAAGACCTACTACTCTGAACTTAGCAGTGAATATCAAAATTTTGAGGTTCAGTTCAGGAAATCCTTTCGTGCCAAGTATCCTGAGGAGGACAACAGCAGCCCGGGATTTTATGTTCTGCAAGCACATGATAGCATTAAAATTGTTGGACAAGCTATAGATAGAATGGAGAGTGACAGAAACACTCTGCTAAGAGAAATACTTTCTAGCAATTTCGTTGGCTTAAGTGGAGAAATTCGATTTGAAGCAGCGCAGCTCTTTCAGAATTCTACCTTCAGGATTGTAAATGTGGATAGGAAGAGTTACAGAGAGTTAGACTTTTGGACTCCAGAAGGTGGGTTCATGAGTAGCCTTCCTCCAGAACAAGGTTCAAATAGTGTTTCTAGAAACACCGAAAGTTTAAGTGAGGTTGTAATATGGCCAAGGAAACTAACAACAATTCCAAAGGGATGGAATCTGCCTACTAAACAAAAACCAATGAAAATAGCGGTTCCTGGAAGAACCTCCTTTTCCAAGTTTGTCAAGGTTGATCGTGACGAGCTTACAAATTCATATACATACACTGGATTCTGCATTGACATTTTTGAGAAGGCGTTAATCCATTTGGGGTATGACCTGCCATATGAGTTTCATCCCGTCAATGGAACCTATCCCGATCTGGTTCAACTGGTCTATAACAAGACTTACGATGCTGTTGTTGGCGACGTGACCATATTAGAAGAAAGATTGCAATATGTAGATTTTACGATGCCATATGCAGAATCAGGATTGTCAATGATAGTTACGGAAAAGTCCGAAGAATCGACATGGATGTTTATGAAGCCCTTCACCTGGCAAATGTGGGTGGCAACTGGTGCCGTGTTGATGTACACAATGGTAGTTGTTTGGTGCCTGGAGAGGAAACCCAATCCTGAGTTTCAAGGCAATTGGAAAAGCCAGATCAGCACTGCGCTTATGTTTACCTTCTCCTCTCTATTCTTTGCTCACAGGGAGAAAATTTATAATAACTTAACTCGAGTGGTGATGGTATCATGGCTGTTTCTAGTTTTGATTCTTAACTCAAGCTACACTGCTAGTCTTTCTTCCATGCTCACAGTTCAACGACTGCGACCAAATGTGACTGACATTGAGTGTCTGAAGAAGAACAACATGAAAATTGGTTGTGACGGTGACTCATTTGTTAGGACATACCTAGAGCAAGTCGAAGACTTCAAGCCAGAGAACATCCTACACATTAATAGTGAATATAGTTATGAAGATGCATTCAAAAATAACACAATAGCAGCTGCTTTTCTCGAAGTCCCCTATGAAAAAGTATATATCAGTAAATATTGCAAGGGATACTCTGCCTTTGTGCCTACCATCAAATTCGGAGGACTGGGATTTATGTTCCAGAAAGGCTCCCCAGTGGCCAAGGACTTTTCCAGAGCTATACTGAAGCTCTTAGAGCAGGGAGAAATAAAGAAGTTAGAAGCCAAATGGTTGAACGCAGATGAGTGCTTCAACAATTCGACCTCCGATAGTACACAAAGTTTGAGGCTTGGAAGTTTCTGGGTTCTGTACGTCATTTCTGGTGTCACTTCTACTATTTGTTTTCTCCTATACACCATCCAGTCGCTGAAATCTAGTCACACATTCCAACATGAGGCAGAAGAACGTAATGGCAACCTTAGTGATGAAAGCCAATGGAAAAGGATACTTGTTATAGCTAAGCATATCTATAGCAGGAAACATTCACCATTTACACGCGAGCATCAGCAGGCAATGGCTCCACAATTACCAGATATCATAACGGTGACTTCCCCACCAACAGTTACTGTTCACAACTCTTGA 2688 0.4152 MNLPSTICLSYLLLTFLLITYYQVEATDGDNQVISIGAIIDVNSRIGKEQRVAMDLAAQTYNTTSNTYKLALHFQQPIKDPFRPTSLARRMIMRQKMQVIIGMHTWKEAASVAELVRKSQVPVISFAAPSISPSLMPIRWPSLVRMANNGTAYAKCVADMVHAYSWQRVVVIYEDGDYEMLALLSETLQDVGSLIEYRLALPSLSYLSNPGEFIREELFKVIENTQSRVFIVLQSSLEMVIQLFREASQMGLVDGESAWIIPESITNLLDSVNKSAISYMEGALGIKTYYSELSSEYQNFEVQFRKSFRAKYPEEDNSSPGFYVLQAHDSIKIVGQAIDRMESDRNTLLREILSSNFVGLSGEIRFEAAQLFQNSTFRIVNVDRKSYRELDFWTPEGGFMSSLPPEQGSNSVSRNTESLSEVVIWPRKLTTIPKGWNLPTKQKPMKIAVPGRTSFSKFVKVDRDELTNSYTYTGFCIDIFEKALIHLGYDLPYEFHPVNGTYPDLVQLVYNKTYDAVVGDVTILEERLQYVDFTMPYAESGLSMIVTEKSEESTWMFMKPFTWQMWVATGAVLMYTMVVVWCLERKPNPEFQGNWKSQISTALMFTFSSLFFAHREKIYNNLTRVVMVSWLFLVLILNSSYTASLSSMLTVQRLRPNVTDIECLKKNNMKIGCDGDSFVRTYLEQVEDFKPENILHINSEYSYEDAFKNNTIAAAFLEVPYEKVYISKYCKGYSAFVPTIKFGGLGFMFQKGSPVAKDFSRAILKLLEQGEIKKLEAKWLNADECFNNSTSDSTQSLRLGSFWVLYVISGVTSTICFLLYTIQSLKSSHTFQHEAEERNGNLSDESQWKRILVIAKHIYSRKHSPFTREHQQAMAPQLPDIITVTSPPTVTVHNS* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00835 895 FunFam Glutamate receptor 554 684 - -
Phac3g00835 895 FunFam Glutamate receptor 153 318 - -
Phac3g00835 895 Pfam Bacterial extracellular solute-binding proteins, family 3 470 781 IPR001638 -
Phac3g00835 895 Gene3D - 453 553 - -
Phac3g00835 895 SUPERFAMILY Periplasmic binding protein-like II 422 783 - -
Phac3g00835 895 SMART GluR_14 446 782 IPR001320 GO:0015276|GO:0016020
Phac3g00835 895 CDD GluR_Plant 443 780 - -
Phac3g00835 895 Gene3D - 722 786 - -
Phac3g00835 895 Pfam Ligand-gated ion channel 782 811 IPR001320 GO:0015276|GO:0016020
Phac3g00835 895 CDD PBP1_GABAb_receptor_plant 35 403 IPR044440 -
Phac3g00835 895 Pfam Receptor family ligand binding region 52 384 IPR001828 -
Phac3g00835 895 Gene3D - 151 318 - -
Phac3g00835 895 Gene3D - 333 448 - -
Phac3g00835 895 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 827 IPR015683 -
Phac3g00835 895 SUPERFAMILY Periplasmic binding protein-like I 31 435 IPR028082 -
Phac3g00835 895 Gene3D - 554 689 - -
Phac3g00835 895 PIRSF IGluLR_plant 5 348 IPR017103 -
Phac3g00835 895 PIRSF IGluLR_plant 343 879 IPR017103 -
Phac3g00835 895 FunFam Glutamate receptor 444 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00835 Phac-Chr3 7197841 7201547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00835 24 836 Ion Channels AT2G29120 32.824 1.34e-141 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00835 - - gmx:100780320 1414.05