Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00824 ATGTACTTGTTTTCCTTATTCCAGTCTCTGATGAAAGTTTGTGATGATGATTATTTGAATTGGTTTGTTCTTGGTTTTAATGCTGAGGCAGTGTTCGGATATCAAACAATGAGTAGAGGTGGAAAAAACATGACAAAATTGGAAGCCGTGGAATATTTAAAAGAAGTGCAGATGAGATTTGAAGACAAGGAAAAGTTCGTGGATTTTTTGAAGATCATAACCGATTATAGAGTTCGCAGAATGACTGTTGGGAGTGTGGTAGAAAAAGTGGAGGAATTTCTTAAAGACCACCATGATCTCATTTCTGGATTTAACAACTTTCTTCCAAAGGGATATGAAATCCTTCTTCCACCTAAGGGTGCAGTCCAGTTGGAAGATGCTATCAAATATGTGCAGAAGGTTAAGGATCGATTTGAAGACACGGATGGTACCTACAAGGCATTTGTAAAGATATTAACTGATAGGCACGAAAATGTCATGTCAGTTGGTGAAGTATACCATGAGGCAAGTGTTGTCTATGTTGAAAAACTTTTTGAGGGTCACCATGATCTTGTTCGTGATTTCGCTCTGTTTTTGCCATCTCATGATGCTTAA 594 0.3771 MYLFSLFQSLMKVCDDDYLNWFVLGFNAEAVFGYQTMSRGGKNMTKLEAVEYLKEVQMRFEDKEKFVDFLKIITDYRVRRMTVGSVVEKVEEFLKDHHDLISGFNNFLPKGYEILLPPKGAVQLEDAIKYVQKVKDRFEDTDGTYKAFVKILTDRHENVMSVGEVYHEASVVYVEKLFEGHHDLVRDFALFLPSHDA* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00824 197 SUPERFAMILY PAH2 domain 43 110 IPR036600 GO:0006355
Phac3g00824 197 Pfam Paired amphipathic helix repeat 65 108 IPR003822 GO:0006355
Phac3g00824 197 Pfam Paired amphipathic helix repeat 144 192 IPR003822 GO:0006355
Phac3g00824 197 ProSiteProfiles PAH domain profile. 42 111 IPR003822 GO:0006355
Phac3g00824 197 ProSiteProfiles PAH domain profile. 120 195 IPR003822 GO:0006355
Phac3g00824 197 SUPERFAMILY PAH2 domain 120 194 IPR036600 GO:0006355
Phac3g00824 197 Gene3D Paired amphipathic helix 126 193 IPR036600 GO:0006355
Phac3g00824 197 PANTHER SIN3B-RELATED 47 197 IPR039774 GO:0003714
Phac3g00824 197 Gene3D Paired amphipathic helix 48 109 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00824 Phac-Chr3 7130278 7132999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00824 120 192 WRKY Transcription Factor Family AT4G12020 35.135 2.68e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac3g00824 PAH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00824 K11644 - var:108321439 228.794