Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00823 ATGTACTTGTTTTCTTTATTCAAGTCTCTGATGAAAGGTATGCTCCAGTCTCTGATGAAAGTGTCCGTATCTCAAACAATGAGTAGAGGTGGAAAACACATGACAAAATTGGAAGTCGTGGAATATTTAAAAGAAGTGCAAATGAGATTTGAAGACAAGGAAAAGTTCGGGGAGTTTTTGAAGATCATAACCGATTATAGGGTTCGCAGAATGACTGTTGGGAGTGTGGATCGATTTGAAGACACAGATGGTACCTACAAGGCATTTGTAAAGATATTAACTGATAGGCACGAAAATGGCATGTCAGTTGGTGAAGTATACCATGAGGCAAGTGTTGTCTACGTTGAAAAACTTTTTGAGGGTCACCATGATCTTGTTCGTGATTTCGCTCTATTTTTGCCATCTGATGATGCTTAA 417 0.3861 MYLFSLFKSLMKGMLQSLMKVSVSQTMSRGGKHMTKLEVVEYLKEVQMRFEDKEKFGEFLKIITDYRVRRMTVGSVDRFEDTDGTYKAFVKILTDRHENGMSVGEVYHEASVVYVEKLFEGHHDLVRDFALFLPSDDA* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00823 138 ProSiteProfiles PAH domain profile. 46 136 IPR003822 GO:0006355
Phac3g00823 138 PANTHER SIN3B-RELATED 78 138 IPR039774 GO:0003714
Phac3g00823 138 SUPERFAMILY PAH2 domain 78 135 IPR036600 GO:0006355
Phac3g00823 138 SUPERFAMILY PAH2 domain 35 70 IPR036600 GO:0006355
Phac3g00823 138 Pfam Paired amphipathic helix repeat 85 133 IPR003822 GO:0006355
Phac3g00823 138 Gene3D Paired amphipathic helix 75 134 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00823 Phac-Chr3 7116950 7119896 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac3g00823 PAH 9.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00823 - K23804 var:108321439 122.864