Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00822 ATGTACTTGTTTTTCCTATTCCAGTTTCTGATGAAAGGTATCCTCCAGTCTCTGATGAAAGTGTTCGGATATCAAACAATAAGTAGAGGTGAAAAAAACATGACAAAATTGGAAATCGTGGAATATTTAAAAGAAGTGCAGATGAAATTAGAAGACAAGGAAAAGTTCGGGGAGTTTTTGAAGATCATAATTGATTATAGAGTTCGCAGAATGACTGTTGGGAGTGTGGTAGAAAAAGTGGAGGAATTTCTTAAAGACCACCATGATCTCCTTTCTGGATTTAACAACTTTTTGCCAAAGGGTTATGAAATCCTTCTTCCACCTAAGGGTGCAGTCCAGTTGGAAGATGCTATCAAATATGTGCAGAAGGTTAAGGATCGATTTGAAGACACAGATGGTATCTACAAGGCATTTGTAAAGATATTAACTGATAGGCACGAAAATGGCATGTCAGTTGGTGAAGTATACCATGAGGCAAGTGTTGTCTATGTTGAAAAACTTTTTGAGGGTCACCGTGATCTTGTTCGTGATTTTGCTCTGTTTTTGCCATCTGATGATGCTTAA 564 0.3741 MYLFFLFQFLMKGILQSLMKVFGYQTISRGEKNMTKLEIVEYLKEVQMKLEDKEKFGEFLKIIIDYRVRRMTVGSVVEKVEEFLKDHHDLLSGFNNFLPKGYEILLPPKGAVQLEDAIKYVQKVKDRFEDTDGIYKAFVKILTDRHENGMSVGEVYHEASVVYVEKLFEGHRDLVRDFALFLPSDDA* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00822 187 ProSiteProfiles PAH domain profile. 30 101 IPR003822 GO:0006355
Phac3g00822 187 PANTHER SIN3B-RELATED 40 187 IPR039774 GO:0003714
Phac3g00822 187 SUPERFAMILY PAH2 domain 108 184 IPR036600 GO:0006355
Phac3g00822 187 Pfam Paired amphipathic helix repeat 134 182 IPR003822 GO:0006355
Phac3g00822 187 Pfam Paired amphipathic helix repeat 54 98 IPR003822 GO:0006355
Phac3g00822 187 Gene3D Paired amphipathic helix 40 99 IPR036600 GO:0006355
Phac3g00822 187 Gene3D Paired amphipathic helix 116 183 IPR036600 GO:0006355
Phac3g00822 187 ProSiteProfiles PAH domain profile. 110 185 IPR003822 GO:0006355
Phac3g00822 187 SUPERFAMILY PAH2 domain 33 102 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00822 Phac-Chr3 7109238 7112052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00822 110 185 WRKY Transcription Factor Family AT4G12020 32.895 3.33e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac3g00822 PAH 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00822 K11644 - var:108321439 216.853