Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00811 ATGGACTCCAACACTCTCGTTTCATGGCCGAGGATGTCAGAAAACATCGAGGCTTTTGGTCTCTCACCCAAGAAATCCGAACAGGTTCATGTTTTAGCAGTTGATGACAGCCTCGTTGATCGCAAAGTCATCGAACGCTTGCTCAAAGTCTTAGCTTACAAAGTTACTGCTGTGGATAGTGGGCTTAGAGCACTACAATTGCTTGGACTATTGGACGAGCAGAAAATTCCCTCTGAAACTAATGGTTTTGCTCAGGGTTTAAAGGTGGATCTAATCATCACAGACTACTGTATGCCTGGAATGACAGGTTATGAGTTACTGAAGAAAATCAAGGAATCGTCCACTTTCAAGGAAACTCCTGTGGTGATTATGTCCTCTGAAAACGTTTTGCCACGCATAGACAGATGTTTGGAGGAGGGTGCAGAGGATTTCATAGTTAAGCCAGTGAAGTTATCTGACGTGAAGCGTTTGAAGGATTACATGGCAACGAAGGAGGCTAAGGCTGAAGGCCAAGACAGGGAAGGGATCCACAAAAGGAAGCTATTAGACACTTCTGATGTGTCATCATCATCACCACCGTCTACTTCCTCGTCATCACTTCCACCATCTTCACCCTCAGTGATTCACTCTCCAATCAGACGGCTTAAAATGACCAGCACTGATTGA 666 0.4489 MDSNTLVSWPRMSENIEAFGLSPKKSEQVHVLAVDDSLVDRKVIERLLKVLAYKVTAVDSGLRALQLLGLLDEQKIPSETNGFAQGLKVDLIITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMATKEAKAEGQDREGIHKRKLLDTSDVSSSSPPSTSSSSLPPSSPSVIHSPIRRLKMTSTD* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00811 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 188 IPR045279 GO:0009736
Phac3g00811 221 Gene3D - 29 197 - -
Phac3g00811 221 ProSiteProfiles Response regulatory domain profile. 30 162 IPR001789 GO:0000160
Phac3g00811 221 Pfam Response regulator receiver domain 31 154 IPR001789 GO:0000160
Phac3g00811 221 SUPERFAMILY CheY-like 28 157 IPR011006 -
Phac3g00811 221 SMART REC_2 29 161 IPR001789 GO:0000160
Phac3g00811 221 MobiDBLite consensus disorder prediction 185 206 - -
Phac3g00811 221 MobiDBLite consensus disorder prediction 166 221 - -
Phac3g00811 221 CDD REC_typeA_ARR 31 157 - -
Phac3g00811 221 MobiDBLite consensus disorder prediction 166 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00811 Phac-Chr3 6984255 6985775 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00811 23 213 Response Regulator Gene Family AT1G59940 58.738 3.98e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac3g00811 Response_reg 6.8e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00811 K14492 - gmx:100527828 311.612