Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00810 ATGGACTCCAACACTCTCGTTTCATGGCCGAGGATGTCAGAAAACATCGAGGCTTTTGGTCTCTCACCCAAGAAATCCGAACAGGTTCATGTTTTAGCAGTTGATGACAGCCTCGTTGATCGCAAAGTCATCGAACGCTTGCTCAAAGTCTTAGCTTACAAAGTTACTGCTGTGGATAGTGGGCTTAGAGCACTACAATTGCTTGGACTATTGGACGAGCAGAAAATTCCCTCTGAAACTAATGGTTTTGCTGGTTTAAAGGTGGATCTAATCATCACAGACTACTGTATGCCTGGAATGACAGGTTATGAGTTACTGAAGAAAATCAAGGAATCGTCCACTTTCAAGGAAACTCCTGTGGTGATTATGTCCTCTGAAAACGTTTTGCCACGCATAGACAGATGTTTGGAGGAGGGTGCAGAGGATTTCATAGTTAAGCCAGTGAAGTTATCTGACGTGAAGCGTTTGAAGGATTACATGGCAACGAAGGAGGCTAAGGCTGAAGGCCAAGACAGGGAAGGGATCCACAAAAGGAAGCTATTAGACACTTCTGATGTGTCATCATCATCACCACCGTCTACTTCCTCGTCATCACTTCCACCATCTTCACCCTCAGTGATTCACTCTCCAATCAGACGGCTTAAAATGACCAGCACTGATTGA 663 0.448 MDSNTLVSWPRMSENIEAFGLSPKKSEQVHVLAVDDSLVDRKVIERLLKVLAYKVTAVDSGLRALQLLGLLDEQKIPSETNGFAGLKVDLIITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMATKEAKAEGQDREGIHKRKLLDTSDVSSSSPPSTSSSSLPPSSPSVIHSPIRRLKMTSTD* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00810 220 SMART REC_2 29 160 IPR001789 GO:0000160
Phac3g00810 220 ProSiteProfiles Response regulatory domain profile. 30 161 IPR001789 GO:0000160
Phac3g00810 220 CDD REC_typeA_ARR 31 156 - -
Phac3g00810 220 SUPERFAMILY CheY-like 28 156 IPR011006 -
Phac3g00810 220 Gene3D - 29 196 - -
Phac3g00810 220 MobiDBLite consensus disorder prediction 184 205 - -
Phac3g00810 220 MobiDBLite consensus disorder prediction 165 220 - -
Phac3g00810 220 MobiDBLite consensus disorder prediction 165 183 - -
Phac3g00810 220 Pfam Response regulator receiver domain 31 153 IPR001789 GO:0000160
Phac3g00810 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 187 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00810 Phac-Chr3 6984255 6985775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00810 23 212 Response Regulator Gene Family AT1G59940 59.512 5.22e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac3g00810 Response_reg 5e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00810 K14492 - gmx:100527828 316.235