Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00794 ATGAACGCGGAATCACCGGCAGCACTCCTCATGTCGGTTTCCTGTATCTCCGACTACGACCTCAACTGCGACGAGGAAACCTCCGGCATCCTCTCCGGAGAGTCGCCGGAATGCTCGTCCGACATAGATTCCTCTCCCCCGCCGCCGTCTCCACCACCGTCCACGGAGGACTATTCAATCGCTAGGTTCATCGAACACGAGCGCAACTTCGTCCCCGGATTCGACTACCTCTCTAGGTTCCAATCTCGCTCCCTCGACGCCGACGCCAGAGAGGAATCCGTTGCATGGATTCTCAAGGTACACGCGTTTTATGGCTTTCAACCTTTAACGGCGTACCTTGCCGTCAATTATATGGATCGGTTTATGGATTCTCGCCAGTTACCCCAAACAAATGGGTGGCCTCTGCAACTTCTATCTGTTGCATGTTTGTCTTTGGCAGCAAAGATGGAGGAACCTCTGGTTCCATCTCTCTTGGACCTTCAGATAGAAGGTGCCAAGTACATGTTTGAGCCGAGAACAATTCGTAGGATGGAGCTACTTGTTCTTAGTGTCTTGGATTGGAGGCTAAGATCAGTAACCCCACTTTGTTTCCTCGCTTTCTTTGCGTGCAAAGTAGATTCAACAGGAACTTTTACCACGTTTCTCATTTCCCAGGCCACGGAAATCATCGTGGCAAATATTCAAGAGGCTAGCTTTCTTGCTTACCGGCCGTCATGCATTGCTGCCGCAGCCATAGTTTCTGCAGCTAAGGAAATTCCTAATTGGGCTGCCCTTAAGCCTGAGCATGCCGAGTCTTGGTGCGAGGGACTAAGAAAAGAAAAAATTATAGGATGCTACCAGTTGATGCAAGAACTTGTGGTTAACAATAACCGTAGAAAACTCCCTATAGTGTTGCCACAGCTGCGAGTAACAACTCGAACTCGAATGAGGTCAAGTGTCTCATCATTCTCATCGTCATCCTCTTCATCTTCCTTCTGCTTGTCTTGTAAGAGGAGGAAATTAAATAACTGTTTGTGGGTAGACGACAAAGGGAACTCCGAGTGA 1044 0.4895 MNAESPAALLMSVSCISDYDLNCDEETSGILSGESPECSSDIDSSPPPPSPPPSTEDYSIARFIEHERNFVPGFDYLSRFQSRSLDADAREESVAWILKVHAFYGFQPLTAYLAVNYMDRFMDSRQLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYMFEPRTIRRMELLVLSVLDWRLRSVTPLCFLAFFACKVDSTGTFTTFLISQATEIIVANIQEASFLAYRPSCIAAAAIVSAAKEIPNWAALKPEHAESWCEGLRKEKIIGCYQLMQELVVNNNRRKLPIVLPQLRVTTRTRMRSSVSSFSSSSSSSSFCLSCKRRKLNNCLWVDDKGNSE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00794 347 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Phac3g00794 347 ProSitePatterns Cyclins signature. 90 121 IPR006671 -
Phac3g00794 347 SUPERFAMILY Cyclin-like 174 287 IPR036915 -
Phac3g00794 347 FunFam D2/4-type cyclin 73 190 - -
Phac3g00794 347 SMART cyclin_7 95 183 IPR013763 -
Phac3g00794 347 SUPERFAMILY Cyclin-like 60 189 IPR036915 -
Phac3g00794 347 MobiDBLite consensus disorder prediction 28 57 - -
Phac3g00794 347 Gene3D - 73 190 - -
Phac3g00794 347 PANTHER CYCLINS 63 290 IPR039361 -
Phac3g00794 347 Gene3D - 63 253 - -
Phac3g00794 347 Pfam Cyclin, C-terminal domain 192 302 IPR004367 -
Phac3g00794 347 SMART Cyclin_C_2 192 325 IPR004367 -
Phac3g00794 347 Pfam Cyclin, N-terminal domain 62 189 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00794 Phac-Chr3 6805691 6810297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00794 9 346 Core Cell Cycle Gene Families AT1G70210 59.357 4.97e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00794 K18810 - gmx:100818190 552.362