Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00766 ATGAGTTGGGTTCATTCTCAAATCTGCCATAGCAGTGATGCTATTAACAACCCCGCTAGTATTTCCCCATCTTCTTGTTCTTCTTCTGCACCATTGCCTTACAGTTCTGAGTACAAGAAACAACTGGCCCCTCCTCTATCTTCTTCATCTGGCTCTAGAATAAGCCCTGCAATTGTTTTCATCTTTGTCATTCTAGCTATTGTGTTTTTCATCTCTGGTCTCCTTCACTTGCTTGTTAGATTCCTCATAAGGCACATGTCCTCTTCGTCAATTTCCCAGTCCAATAGGTACCCTGACATGTCTGAACCTGATCCTTACCAGAGGCAGTTACAGCAGCTCTTCCATCTCCATGATTTAGGCCTAGATCAGGCCTTCATAGATGCTCTCCCAGTTTTCCTATACAAAGACATAATAGGTTTGAAGGAGCCTTTTGATTGTGCAGTGTGCCTTTGCCAGTTCTCCGAACAAGACATGCTGAGGCTGCTGCCCATTTGCAACCATGCTTTTCACATTGATTGCATAGACACATGGCTGCTTTCAAATTCAACTTGTCCTCTCTGCAGAGGGAGTCTTTATGAGCCAGGCTTTGCCTTTGAAAACCCAGTTTATGACTTTGAGGGTCTGAGGGAGGAACCTGGGGTTTCGGGCAGTGCTGCTGGAGAGGCTGGTTCCTTTAACAAACATGCAGAAAATCACATAATGAGTGGGAAAAGGGTGTTTTCTGTGAGGCTTGGGAAGTTTAGAAGCTCAAATAATGGAGAAGGGGTGGAAAGAGGAGGAGGAGGAGGAGGGGAGAGCAGTACAAGTAATTTGGATGCTAGGAGATGCTATTCAATGGGGTCCTTCCAGTATGTGGTTGCTGATTCAGATTTGCAAGTGGCTTTGTGCCCCAATAGAGGTGATGGTGGAGGTACCAGTGGTGGCAGTGTGAGACAATTTAAAGGTAGATTGGACAATTTTGGGAATTCTTCCACTGACTTGGATGTTGAGGGCAAAAAAATCAACATTGCAAGGAAAGGTGAAAGTTTTTCTGTTTCCAAGATCTGGCAATGGTCTAGGAAGGACAAGGTATCAAGTTCACCACAAAACTATTTGGGTGGTTCTAATGTCACTACTGCAGCTTTGCCATGGATGAATAGAGCTCAAGGTACATGA 1155 0.4468 MSWVHSQICHSSDAINNPASISPSSCSSSAPLPYSSEYKKQLAPPLSSSSGSRISPAIVFIFVILAIVFFISGLLHLLVRFLIRHMSSSSISQSNRYPDMSEPDPYQRQLQQLFHLHDLGLDQAFIDALPVFLYKDIIGLKEPFDCAVCLCQFSEQDMLRLLPICNHAFHIDCIDTWLLSNSTCPLCRGSLYEPGFAFENPVYDFEGLREEPGVSGSAAGEAGSFNKHAENHIMSGKRVFSVRLGKFRSSNNGEGVERGGGGGGESSTSNLDARRCYSMGSFQYVVADSDLQVALCPNRGDGGGTSGGSVRQFKGRLDNFGNSSTDLDVEGKKINIARKGESFSVSKIWQWSRKDKVSSSPQNYLGGSNVTTAALPWMNRAQGT* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00766 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 193 IPR013083 -
Phac3g00766 384 SMART ring_2 146 187 IPR001841 -
Phac3g00766 384 CDD RING-H2_EL5-like 145 188 - -
Phac3g00766 384 ProSiteProfiles Zinc finger RING-type profile. 146 188 IPR001841 -
Phac3g00766 384 SUPERFAMILY RING/U-box 125 194 - -
Phac3g00766 384 Pfam Ring finger domain 145 188 IPR001841 -
Phac3g00766 384 MobiDBLite consensus disorder prediction 251 270 - -
Phac3g00766 384 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 48 349 - -
Phac3g00766 384 FunFam RING-H2 finger protein ATL46 108 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00766 Phac-Chr3 6597981 6601684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00766 48 356 C3H Transcription Factor Family AT2G18650 38.988 8.54e-53 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00766 - - gmx:100818135 556.984