Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00718 ATGCGGTGTCATGGCTTAACCGTACACGGAAGCAACCACCGTGGCTTCTGCGTCCCCACCGTGTCTCCGGTGTTCTTGAGACCCACCCGACCCGTCACCCGTATCGCGTTTCCCAAGGCTACTCTGAAGAACGAGGGACTAATGACGGAGTTTAGCTTCTACGAGCTTCTGGGTATACCCGAATCCGGTTCCTTGATGGACATTAAGAACGCGTACAAGCAACTCGCCCGAAAGTACCACCCGGACGTGTCTCCTCCGGGTCGGGTCGAGGAGTACACCAAACGGTTTATTCAGGTGCAGGAAGCCTACGAAACTCTCTCCGATCCTTCGCGAAGAGCCATGTACGATCATGACATGGCCAAGGGCATTAACTTCGCTTTCAACGCCCGCAGACGCCGCAACTACCACGATCAGGTGGTGGAGCAAAAAACTGAATGGAAATCTAGGTGGCAATCTCAACTGTCAGAGCTGAAGAGAAGAAGTAGCAGCAAGGATGGTGGAGGAGGGAACATGTCATGGGCAGCTAGAATGCGCCAGCAGAGGGATGAATTGTCTAATGAATATTCTAATGAATCATGA 579 0.525 MRCHGLTVHGSNHRGFCVPTVSPVFLRPTRPVTRIAFPKATLKNEGLMTEFSFYELLGIPESGSLMDIKNAYKQLARKYHPDVSPPGRVEEYTKRFIQVQEAYETLSDPSRRAMYDHDMAKGINFAFNARRRRNYHDQVVEQKTEWKSRWQSQLSELKRRSSSKDGGGGNMSWAARMRQQRDELSNEYSNES* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00718 192 PRINTS DnaJ domain signature 54 72 IPR001623 -
Phac3g00718 192 PRINTS DnaJ domain signature 91 111 IPR001623 -
Phac3g00718 192 PRINTS DnaJ domain signature 72 87 IPR001623 -
Phac3g00718 192 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 48 184 - -
Phac3g00718 192 SMART dnaj_3 51 111 IPR001623 -
Phac3g00718 192 SUPERFAMILY Chaperone J-domain 48 123 IPR036869 -
Phac3g00718 192 CDD DnaJ 53 108 IPR001623 -
Phac3g00718 192 FunFam Chaperone protein dnaJ 20, chloroplastic 40 148 - -
Phac3g00718 192 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Phac3g00718 192 ProSiteProfiles dnaJ domain profile. 52 119 IPR001623 -
Phac3g00718 192 Pfam DnaJ domain 53 116 IPR001623 -
Phac3g00718 192 Gene3D DnaJ domain 39 160 IPR036869 -
Phac3g00718 192 MobiDBLite consensus disorder prediction 151 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00718 Phac-Chr3 5976427 5979282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00718 54 116 C2H2 Transcription Factor Family AT1G74250 43.939 2.43e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00718 - - gmx:100101903 304.293