Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00687 ATGCAATCTCTCAAGTCACAACCTGCTTTTTCGTTTTCTCTTTTCAATCAATTCTCCTCTCACTGTCTCACATCCTTCCTCTCTTTCTCAACCAAATCTCATTGCCTACACTTCAATCAAACCACTTCGATAATTGATTACCTAAATTCCAACTTCCAATTCTCCACAACCCAATCCCTTTATATTTCGAAATGTGTTTCAAGGGGCAGATTACCTCAAAACTCCTTATCAGTGCTCACTTTTTTCAAAAAAATAGGCTTTTCCCAAACCCAGATTCTCTCTGTGATTCGTCAAAGACCCCAGATACTGTTTACAGATGTTGACAAAATCTTGAGACCCAAAATTCAGTTCTTTCAGCTGTCTGGATTCCAGGGTTGCGAGTTATGCAGTTTCATTTCCAAGAATCCCTCCATTTTGACTCATAGCTTGAAGAAAACCTTGGTCCCCTCAGTTGAAGCTATTAGGAAAATTGTGTGCGATCAGAAAGATTTTCTTCTTGTGTTGCGCAGATGTGGCTGGATACTCCCAAAGTACAAAAGGTTTATGGACAATGTCGTCTTCTTGGAGAGGTGTGGCATTCTTGGGGCTCATCTTGCATTGCTACTCAGACTTCATCCAAGGCTTTTCCTTGCACACCAGTCTACTATTGGAAACAGTGTTTCTCGAGCTGTAGACTTGGGTTTCCGTGAAAGTTCAAGAATGTTTGTCCATGCTATTCATACATTAAGTTGTTTGAGCGATAAAACATTTGAGAGAAAGCTGAAACTAATTAATTGTTTTGGGTTTTCCAAGGATGAGGGCTTGCAAATGTTCAAGAGAACCCCGACTTTGTTTAGAACATCAGAGAAGAAGTTGAAAGTTGGAATGGAGTTCTTCTTGCATACAGTTATGCTGCCCAAGTCAGTCCTTGTTCATCTGCCTAAGATTTTAATGTACAGCATGGAGGATCGCGTGCTTCCACGATATAAAGTCTTCCAGTTGTTGAAATCAAAAAATCTTTGCAAGAAAGTCCCCAGTTATATTTATGTGTTGTGCTTGTCTGAGGAGATGTTCTTGGACAAATATATATCACAGTTCAGAGAAAATGCAGAGGAGTTATTAGTAGCATACAAGGGTCACTATCTGGAGGCATAA 1134 0.3986 MQSLKSQPAFSFSLFNQFSSHCLTSFLSFSTKSHCLHFNQTTSIIDYLNSNFQFSTTQSLYISKCVSRGRLPQNSLSVLTFFKKIGFSQTQILSVIRQRPQILFTDVDKILRPKIQFFQLSGFQGCELCSFISKNPSILTHSLKKTLVPSVEAIRKIVCDQKDFLLVLRRCGWILPKYKRFMDNVVFLERCGILGAHLALLLRLHPRLFLAHQSTIGNSVSRAVDLGFRESSRMFVHAIHTLSCLSDKTFERKLKLINCFGFSKDEGLQMFKRTPTLFRTSEKKLKVGMEFFLHTVMLPKSVLVHLPKILMYSMEDRVLPRYKVFQLLKSKNLCKKVPSYIYVLCLSEEMFLDKYISQFRENAEELLVAYKGHYLEA* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00687 377 PANTHER CGI-12 PROTEIN-RELATED 40 358 IPR003690 GO:0003690|GO:0006355
Phac3g00687 377 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Phac3g00687 377 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Phac3g00687 377 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Phac3g00687 377 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Phac3g00687 377 SMART mt_12 199 229 IPR003690 GO:0003690|GO:0006355
Phac3g00687 377 Gene3D Transcription termination factor 3, mitochondrial 176 362 IPR038538 -
Phac3g00687 377 FunFam Mitochondrial transcription termination factor-like 143 363 - -
Phac3g00687 377 Pfam mTERF 79 230 IPR003690 GO:0003690|GO:0006355
Phac3g00687 377 Pfam mTERF 244 351 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00687 Phac-Chr3 5634590 5636327 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phac3g00687 mTERF 2.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00687 K15032 - vvi:100268158 324.324