Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00655 ATGGAAGAGGCAGAGGAGTGCACCAATGCTAACCAGAAATTCACCACCAAAAGAAGGAGCTTCAGGAATGGAGCCAACTCTCATGAGCATCACCGTTATCACCACCACCACCACCATCATCATCATCATCATCATCACTTTCAACACCATCATCAGCTGCTACAATACTCTACTCAGCTTGGTTTCTGCAACAACCAGAACAAGTATCAGAGATACTACCCAGCTCTTCTTCCTCTACCTTCTCTTATACCTCTACAACAACTTCCTTTTACTCCACCCTTCCCTCAAAACCACATCATCAAATCAAAAACCCATTTGCACAAACCTCCATGCAAACTCAATAGCTCTCCCTCGGATTTTAAGCTCGCTCCACCACCTCCTTCTCCTGCTCCAAAGGAACTTCAGCAGCAATCTAAGGCATCCCTTAAAGGAGATGATGGGAAGAAACTCATTCCAGCAAGGAAGCAGCAGGCATTAATTGTTGCAAGGAGGCCAGACTCTGGTGGCCAAGAAGGAACTGTGATCTCTCTTCTTGCCAACCACTTTTTGGTACAATTTGATCCATCACAAAAGATATATCATTACAATGTTGAAATCACTCCCCATCCCTCCAAGGATATTGCCAGAGCAATCAAGCAGAAGTTGGTAAATAACAATTCTGCTGTCCTCTCAGGTGCTATTCCAGCATATGATGGGAGAAAGAATCTCTACAGTCCAGTTGAGTTCCAAAATGATAAGCTAGAGTTCTACATAAGCCTCCCTATCCCCACTAGGAAGCTGGCATCACCCTATGAAGAAATGTCTGACTTGAAAGAGAAGCATGAGCAGCTTAAACTTTTCAGGATAAATATTAAATTGGTCTCAAAAATCAATGGAAAGGAGTTGACTAACTACTTGAGCAAAGAGGATGATGACTGGATTCCACTTCCACAGGATTATCTGCATGCTTTGGATGTAGTTCTTAGGGAGAACCCCACTGAGAAATGCATACCTGTTGGAAGGTCATTCTATTCAAGTTCAATGGGAAGAAGCAAAGACATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTAGCTCTCAATGTGGATTTCTCAGTAACTGCTTTCCATGAGAGCATAGGAGTGATTGCATACCTGCAGAAACGCCTTGAGTTCCTTCGGGACCTTTCTCAGAGGAAGACAGCTCAATTAACTAGTGAAGAGAGGAAGGAAGTGGAGAAAGCATTGAAGAACCTTAGGGTCTTTGTTTGCCACAGGGAAACTGTTCAGAGATACCGTGTCTATGGCTTAACCGAGGAGGCTACTGAAAACCTTTGGTTTGCTGACAGAGATGGGAAGAATCTGAGGCTGGTGAATTACTTTAAAGATCACTATAACTATGACATACAATTCAGAAAATTGCCGTGCTTGCAAATTAGTAGGAGTAAACCTTGTTATCTCCCTATGGAGCTTTGTGTGATCTGTGAAGGCCAAAAGTTCCTTGGAAAGCTGACTGATGATCAAACAGCAAGAATACTCAAAATGGGCTGCCAAAGACCTGGAGAACGAAAAACCACTATTGAAGGAGTCATGAGAGGAAATGTTGGGCCTACCAGTGGTAATCAGGAAAAAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGAAGAATTCTTTTCCCTCCCAAGCTAAAGCTTGGAGATGGAGGCCATGTTAGAAACCTGACACCCTCGCGCCACGACCGGCAATGGAACCTTCTTGATGGCCATGTCTCTGAAGGAAGTACTATCGAAAGGTGGGCATTAATTAGTTTTGGGGGCACACCTGAGCAGAAGTCCAATGTCCCCAGATTCATAAACCAGTTATCTCAAAGGTGTGAACAATTGGGCATTTTTCTCAATAAGAACACAGTTATTAGTCCCCAGTTTGAATCAAGCCAAATTCTTAATAATGTCACCCTTTTGGAATCTAAGCTCAAGAGGATCCAGAGGACCGCCTCAAACAATCTCCAGCTTCTTATTTGCATAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGAATTGCCGAGACTAGTGTTGGTGTTGTGAGCCAATGCTGCCTGTACCCCAATCTCAGCAAATTGAGTTCACAATTTTTGGCTAATCTGGCTCTCAAAATCAATGCCAAAGTCGGTGGATGCACAGTTGCTTTGTACAACTCATTGCCTTCGCAGTTACCACGTCTCTTTCATATTGATGAGCCAGTGATATTCATGGGTGCAGATGTGACACATCCTCACCCTCTTGATGATTTCAGTCCATCTGTTGCTGCTGTTGTCGGTAGCATGAATTGGCCGACAGCAAACAAGTACATTTCAAGAATAAGGTCTCAAACACACAGACAAGAAATCATTCAGGATCTTGGTGCAATGGTGGGGGAATTGCTTGATGATTTTTACCAGGAGGTAGAGAAACTCCCCGGCAGAATCATTTTCTTCAGAGATGGGGTTAGTGAAACTCAGTTTTACAAAGTGTTGGAGGACGAACTTCAGTCAATCAGGTGTGCATGCACAAGGTTTCCTGGTTACAAACCTTCCATTACTTTTGCAGTTGTGCAAAAGAGGCATCACACAAGGTTGTTTCCCTTTGAAACTGACCAGTCTTCAACTCAAAACCATTTTCTGTATGAAAACATTCCTCCAGGGACTGTGGTTGATTCTGTGATCACTCATCCAAATGAATTTGATTTCTACCTTTGTAGCCATTGGGGTGTGAAAGGAACAAGTAGGCCAACTCACTACCATGTCCTGTGGGATGAAAACCAGTTTACTTCTGATGAACTGCAGAAACTGGTTTACAACTTGTGCTACACTTTTGTCAGGTGTACCAAGCCAATTTCTTTGGTTCCTCCTGCGTATTACGCCCATTTAGCTGCATACAGAGGCAGACTCTACCTTGAGAGATCAGAGTCCTTAGGTTTGTTCAGAAATACATCTACACTATCCAGAGCTGCTCCTCCAAAGACAGCACCTCTTCCCAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAG 3084 0.4335 MEEAEECTNANQKFTTKRRSFRNGANSHEHHRYHHHHHHHHHHHHHFQHHHQLLQYSTQLGFCNNQNKYQRYYPALLPLPSLIPLQQLPFTPPFPQNHIIKSKTHLHKPPCKLNSSPSDFKLAPPPPSPAPKELQQQSKASLKGDDGKKLIPARKQQALIVARRPDSGGQEGTVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDIARAIKQKLVNNNSAVLSGAIPAYDGRKNLYSPVEFQNDKLEFYISLPIPTRKLASPYEEMSDLKEKHEQLKLFRINIKLVSKINGKELTNYLSKEDDDWIPLPQDYLHALDVVLRENPTEKCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIAYLQKRLEFLRDLSQRKTAQLTSEERKEVEKALKNLRVFVCHRETVQRYRVYGLTEEATENLWFADRDGKNLRLVNYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLTDDQTARILKMGCQRPGERKTTIEGVMRGNVGPTSGNQEKEFKLQVSREMTKLTGRILFPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVSEGSTIERWALISFGGTPEQKSNVPRFINQLSQRCEQLGIFLNKNTVISPQFESSQILNNVTLLESKLKRIQRTASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQLPRLFHIDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPGRIIFFRDGVSETQFYKVLEDELQSIRCACTRFPGYKPSITFAVVQKRHHTRLFPFETDQSSTQNHFLYENIPPGTVVDSVITHPNEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRNTSTLSRAAPPKTAPLPKLSENIKKLMFYC* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00655 1027 ProSiteProfiles Piwi domain profile. 678 988 IPR003165 GO:0003676
Phac3g00655 1027 MobiDBLite consensus disorder prediction 28 51 - -
Phac3g00655 1027 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 153 990 - -
Phac3g00655 1027 MobiDBLite consensus disorder prediction 1 20 - -
Phac3g00655 1027 Pfam N-terminal domain of argonaute 175 321 IPR032474 -
Phac3g00655 1027 ProSiteProfiles PAZ domain profile. 390 499 IPR003100 GO:0005515
Phac3g00655 1027 SUPERFAMILY PAZ domain 377 535 IPR036085 GO:0005515
Phac3g00655 1027 Gene3D paz domain 376 503 - -
Phac3g00655 1027 MobiDBLite consensus disorder prediction 105 148 - -
Phac3g00655 1027 FunFam Protein argonaute 7 377 503 - -
Phac3g00655 1027 Pfam Piwi domain 679 985 IPR003165 GO:0003676
Phac3g00655 1027 FunFam Argonaute 10 564 740 - -
Phac3g00655 1027 Gene3D - 564 740 - -
Phac3g00655 1027 Gene3D - 750 1027 IPR036397 GO:0003676
Phac3g00655 1027 CDD PAZ_argonaute_like 393 498 - -
Phac3g00655 1027 SMART DUF1785_2 330 382 IPR014811 -
Phac3g00655 1027 SMART Piwi_a_2 678 988 IPR003165 GO:0003676
Phac3g00655 1027 SUPERFAMILY Ribonuclease H-like 663 988 IPR012337 -
Phac3g00655 1027 CDD Piwi_ago-like 547 987 IPR045246 -
Phac3g00655 1027 Pfam PAZ domain 393 515 IPR003100 GO:0005515
Phac3g00655 1027 SMART PAZ_2_a_3 390 530 IPR003100 GO:0005515
Phac3g00655 1027 FunFam protein argonaute 10-like 749 1027 - -
Phac3g00655 1027 MobiDBLite consensus disorder prediction 26 51 - -
Phac3g00655 1027 Pfam Argonaute linker 1 domain 331 380 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00655 Phac-Chr3 5337660 5343351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00655 113 1027 Eukaryotic Initiation Factors Gene Family AT1G48410 40.733 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00655 K11593 - gmx:100797755 1882.84