Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00650 ATGGGAAGGTCACCATGCTGTGAGAAGACGGGGCTGAAAAAAGGACCATGGACACCAGAAGAAGACCAAAAGCTCATTGCTTTCATTGAAAAGCATGGCCATGGAAGCTGGCGTGCTTTGCCTGCAAAAGCTGGACTTAGAAGATGTGGAAAGAGTTGCAGACTTAGGTGGACTAATTATCTCCGACCTGATATAAAAAGAGGAAAGTTCAGCTTGGAGGAAGAGCAAACCATTATTCAACTTCATGCTCTTCTAGGAAACAGATGGTCAGCCATAGCATCTCACTTGGCCAAAAGAACCGACAATGAGATAAAGAACTATTGGAACACTCACCTTAAGAAAAGGCTCGACAAAATGGGCATAGACCCCACCACCCACAAGCCGAAAATCGACTCCCAAATCCACTTCAAAGACGGTTCAAACCTCAGCCACATGGCTCAGTGGGAGAGTGCTCGGCTCGAAGCCGAAGCCAGACTCGTACGAGAATCCAAGTTGCAAGAACAACACAACCTCGTATTAACCTCTTCCTCACCACCACCACCACAACAACCTAGGCTCATTCTCCACAAAATCACACCCCAACACCACCACCACCAACAACAACAACCCTCACTACCACCATGCCTCGACGTGCTCAAAGCATGGCAGAGTTCATGCTCAGACAATAACAACAACAAACACTCATCACTACACGACAAGAAAAAAGCCATGCATGTGCATAGCATGTATGCCATGATGCTTGCCACTGATGACCTTGAATCCCCTACATCCACCTTGTGCTTCCCCGAGAGTATGCAGATCCATAATAATAATAATAACAGTAACGTTATGGTGTCGACCAACCAAGTTGGGTTAATGAATGAGAACTATTTACTTCCTCCAACTGGTGTGGAAGAGTTTATGAGCAAAAGTTTAGGAACGTGTGGTGAGGGTGCAACCGTGAAGGAAGATGCTTGTTGTGGCGGTGATGGTGAGAACAGTGAGACGTGGAGGTACTTCACCAAACACGGCACTGATCATGATGAAGAAGTCGCTGAAACTGAGAAGAGAATTATGCAGCTGACGATGCCATGTTTGGAAGATGAGGACATAATGGTGGCCGTTGATGCATTAAGAGGTGGTGGTTATTATGGTAATAATAATGATGATATTAATAATGATGTGGTGGCATTTACACCTCTCTCTAGAAATGTCAATATGGTTGTTGGTTTCAATAACGACCTGCACGATTTTGATTCCAACCAAGATTTAGCCACCACTGAGAACTTGGAAGTCAACTTCAGGGAGAATAAGGATTATTGGAACAGCATGCTTGGTTATAAGTGA 1326 0.4487 MGRSPCCEKTGLKKGPWTPEEDQKLIAFIEKHGHGSWRALPAKAGLRRCGKSCRLRWTNYLRPDIKRGKFSLEEEQTIIQLHALLGNRWSAIASHLAKRTDNEIKNYWNTHLKKRLDKMGIDPTTHKPKIDSQIHFKDGSNLSHMAQWESARLEAEARLVRESKLQEQHNLVLTSSSPPPPQQPRLILHKITPQHHHHQQQQPSLPPCLDVLKAWQSSCSDNNNNKHSSLHDKKKAMHVHSMYAMMLATDDLESPTSTLCFPESMQIHNNNNNSNVMVSTNQVGLMNENYLLPPTGVEEFMSKSLGTCGEGATVKEDACCGGDGENSETWRYFTKHGTDHDEEVAETEKRIMQLTMPCLEDEDIMVAVDALRGGGYYGNNNDDINNDVVAFTPLSRNVNMVVGFNNDLHDFDSNQDLATTENLEVNFRENKDYWNSMLGYK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00650 441 CDD SANT 69 112 IPR001005 -
Phac3g00650 441 CDD SANT 16 61 IPR001005 -
Phac3g00650 441 SMART sant 13 63 IPR001005 -
Phac3g00650 441 SMART sant 66 114 IPR001005 -
Phac3g00650 441 FunFam MYB-related transcription factor 13 66 - -
Phac3g00650 441 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac3g00650 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac3g00650 441 FunFam MYB transcription factor 68 129 - -
Phac3g00650 441 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac3g00650 441 Gene3D - 69 137 - -
Phac3g00650 441 Gene3D - 13 66 - -
Phac3g00650 441 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac3g00650 441 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac3g00650 441 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac3g00650 441 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac3g00650 441 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00650 Phac-Chr3 5294496 5297699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00650 1 207 MYB Transcription Factor Family AT5G15310 71.226 6.57e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g00650 Myb_DNA-binding 2.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00650 K09422 - gmx:100792994 605.905