Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00647 ATGGGAAGGAAGGTATGTTGTGAGAAGGTAGGGTTGAAGAAAGGACCATGGGCACCAGAAGAAGACAAGAAGCTCCTCGACTACGTTGGGAAGCATGGCCATCGAAACTGGCGTTTAGTGCCTGCCAAAGCGGGTCTTGAAAGATGTGGAAAGAGTTGCAGATTGAGGTGGATTAACTATCTCAAACCTGATATAAAACGAGGAAACTTCAGCACGGAGGAAGACCACACCATTATTCAACTTCATGCTCTTCTTGGAAACAAATGGTCCATCATAGCAGCCCACCTGCCCCAAAGAACAGACAATGAGATCAAGAACTACTGGAAAACCAACATCAAGAAAAGACTCATCGGAATGGGCTTAGATCCCATTACCCACAAAACAATAAAAAAGAACACATTTGAAGGCTGTGGTGATGGCCAAGACCAGTCCAAGGACACCATCAATATCAGGCACGTGGCTCAGTGGGAGAGGGCCCGACTTGAAGCTGAAGCCAGAGGATCTATGTTGCAAGTTGGATCTGGATCCTCAAATCTCTCTGGGCTAATCTTAAGCAAGATTCCAACTCAACCTTGTCTTTCATCACATTCAGTGTCAACCGAGCACAAGAGAGTGCATAACATGTACGCCCTCGTGCTTACCACAAATCATGATTTTAGGTCATCTGTATCCACTTTGAGCATTCCCAAGCTTCCTGCAGTTTCTAATATTCCACAAATCACCAACACAGAAAGTTTACTTACATATAAGGCTGACAATAATGTCATGGAAGGCTGTCTTTCAAACTTACACGATGATGACATTATGGTGGCTGTGGAAGCATTTAGAACAGCAAGGTCTGAGAGTATTGAAGAGCTGTTGAATGAATTTACTTCCATGTAG 882 0.441 MGRKVCCEKVGLKKGPWAPEEDKKLLDYVGKHGHRNWRLVPAKAGLERCGKSCRLRWINYLKPDIKRGNFSTEEDHTIIQLHALLGNKWSIIAAHLPQRTDNEIKNYWKTNIKKRLIGMGLDPITHKTIKKNTFEGCGDGQDQSKDTINIRHVAQWERARLEAEARGSMLQVGSGSSNLSGLILSKIPTQPCLSSHSVSTEHKRVHNMYALVLTTNHDFRSSVSTLSIPKLPAVSNIPQITNTESLLTYKADNNVMEGCLSNLHDDDIMVAVEAFRTARSESIEELLNEFTSM* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00647 293 CDD SANT 69 112 IPR001005 -
Phac3g00647 293 FunFam MYB transcription factor 68 129 - -
Phac3g00647 293 FunFam MYB-related transcription factor 13 66 - -
Phac3g00647 293 CDD SANT 16 61 IPR001005 -
Phac3g00647 293 Gene3D - 13 66 - -
Phac3g00647 293 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac3g00647 293 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Phac3g00647 293 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac3g00647 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac3g00647 293 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac3g00647 293 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac3g00647 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac3g00647 293 Gene3D - 69 116 - -
Phac3g00647 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 199 - -
Phac3g00647 293 SMART sant 13 63 IPR001005 -
Phac3g00647 293 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00647 Phac-Chr3 5197761 5199202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00647 1 194 MYB Transcription Factor Family AT3G01140 59.091 4.27e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g00647 Myb_DNA-binding 6.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00647 K09422 - gmx:100785734 429.483