Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00644 ATGGAGGGCAGAACAAGCTCTGTGCTCCCACCTGGCTTCAGGTTTCACCCCACTGATGAGGAACTAATCGTCTACTACCTTTGTAACCAAGCCATATCAAAACCATGCCCTGCATCAATCATTCCAGAAGTGGATATCTACAAGTTTGATCCATGGGAATTACCTGAGAAAACAGACTTTGGAGAAAATGAATGGTACTTCTTTAGCCCAAGAGAGAGGAAGTACCCAAATGGGGTGAGGCCTAATAGAGCAACTGTGTCTGGGTATTGGAAGGCCACTGGTACTGACAAAGCAATCTATAGTGGCTCTAAGCATATTGGGGTGAAGAAAGCTTTGGTTTTTTACAAGGGTAAGCCACCAAAGGGTCTCAAGACAGATTGGATCATGCATGAGTACAGATTAATAGGATCAAGAAGACAAACCAATAGACAAATGGGATCCATGAGGCTAGATGACTGGGTCTTGTGTAGGATCTACAAGAAGAAGAACATGGGAAAATCATTGGAGGCAAAAGAGGACTACCCAATAGCACAAATCAATCTTACACCACCAAATAATGGCACTGAACAAGAAGTGGTGAAATTTCCAAGGACAAGTTCCCTTACTCATCTTTTGGATATGGATTACTTGGGTCCAATATCACACATACTATCTGATGCATCATACACTTCAACCTTTGATTTTCAACTTAACACTGTCAATGGTGGAATAGACCCGTTCATAAAACCACAGCCACTTGAAATTCCTAATAACCTTTATGCAGCAGACTCAGGGAAGTACCAAGTGAAACAGAACAGCACCATCAACCCCACCATATTTGTGAACCATGTCTATGATCAAAGAGGATAA 849 0.4205 MEGRTSSVLPPGFRFHPTDEELIVYYLCNQAISKPCPASIIPEVDIYKFDPWELPEKTDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQTNRQMGSMRLDDWVLCRIYKKKNMGKSLEAKEDYPIAQINLTPPNNGTEQEVVKFPRTSSLTHLLDMDYLGPISHILSDASYTSTFDFQLNTVNGGIDPFIKPQPLEIPNNLYAADSGKYQVKQNSTINPTIFVNHVYDQRG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00644 282 FunFam NAC transcription factor 18 165 - -
Phac3g00644 282 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Phac3g00644 282 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Phac3g00644 282 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Phac3g00644 282 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 182 - -
Phac3g00644 282 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00644 Phac-Chr3 5150725 5152698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00644 1 216 NAC Transcription Factor Family AT1G69490 68.421 1.02e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac3g00644 NAM 5.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00644 - - gmx:732552 540.806