Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00628 ATGTCTATTAGTGTGCATCTGATACATAGATCCACAAAAGTAAAGTATCCACGCTTAACAGACTACGACACATTACTCCAGAATTTAGGTGATTTAAAGGAAGGAAAGCCTGTTCAAGTTCCCATATATGATTTCAAGTCCAGTACACGAACAGGATACAGGACAGTAGAAGCCCCAACATCTCGTATTGTGTTTATAGAGGGCATCTATGCATTGAGTGAAAAGTTGCGACCTCTACTGGACCTTCGAGTCTCTGTTACAGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGTGATATTCAACGTGCTGGTCAAGAACCCGAAGAAATTATTCATCAAATATCTGAGACGGTGTATCCAATGTACAAGGCCTTTATTGAGCCAGATCTCCAGACAGCACATATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGCCCAACTTACATATTAAAGTCAGCAAAGAATCTAGCAGTGGATCAAATCAAAGCTGTCCTCTCTGAGGATTTTAAGGAAACAACAGAGCAAACTTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAAACTTGCCAGTCATATTTGCGGATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCCTTGGGATACACAATAGCCACTATCCTTAAGAGAAACAGCCATGTTTTTTCTGATGAGAGGGTTTGTGTGAAACTCGATTGGCTTGAGCAACTCAATAGACATTATGTTCAGGTACAAGGAAGAGATCGCTTGGTTTTAAAATACATAGGACAGCAGCTAGGTCTAGATGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAAATTGAAAAGCTTGTGGATGAGGTTATGGCCCTACCAGATGATTTGAAGACAAAACTCAGCCTGGATGAGGATTTGGTTTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACAGAGTTGCCATGAGAAATAAACATCTGAGGAGTGGGATATCACAGTCATATACCAATCAAAGGGACAAAAACCTTGCCAAGGTTGGATTTGATGCCAACAATAGAAGGTTTGGTGAAAGAAATTCAGAGTCCAGTACAATGTCCGTTAATCAGGGAGCCATCAATCAGCTTTCAGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGCATTGAAGAGCTGAATTCCAAGTTAAACACCAAGAGAAATTCTCCAACCCAACAAAATATGTCACTTCAAGCTGAGACATGCAATGGATCAGCTCCCACCTCATACTTCATCACTGGTTTGGGCAATGGTTCCCTAACTGGATCTAAAATGGCAAATTCCTCTTCGTCATCACAATTAACTAAGGATTTTCCTTTAATGGATGAGGTGAGCCACACACATAGGAGAAAAGTGTGTGCCATGGTGTGGTGGTTGTCGGAGGATGGTGGTTTTGATCATGTAGGCACACACTAG 1566 0.4119 MSISVHLIHRSTKVKYPRLTDYDTLLQNLGDLKEGKPVQVPIYDFKSSTRTGYRTVEAPTSRIVFIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSAKNLAVDQIKAVLSEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDERVCVKLDWLEQLNRHYVQVQGRDRLVLKYIGQQLGLDGSYIPRTYIEQIQIEKLVDEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHLRSGISQSYTNQRDKNLAKVGFDANNRRFGERNSESSTMSVNQGAINQLSDQISALNDRMDEFTNRIEELNSKLNTKRNSPTQQNMSLQAETCNGSAPTSYFITGLGNGSLTGSKMANSSSSSQLTKDFPLMDEVSHTHRRKVCAMVWWLSEDGGFDHVGTH* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00628 521 SUPERFAMILY CYTH-like phosphatases 168 310 IPR033469 -
Phac3g00628 521 Pfam CYTH domain 155 307 IPR023577 -
Phac3g00628 521 PANTHER URIDINE KINASE 20 326 - -
Phac3g00628 521 Gene3D - 6 148 IPR027417 -
Phac3g00628 521 Gene3D - 157 315 - -
Phac3g00628 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 141 IPR027417 -
Phac3g00628 521 CDD UMPK_like 16 142 - -
Phac3g00628 521 Coils Coil 405 439 - -
Phac3g00628 521 ProSiteProfiles CYTH domain profile. 151 313 IPR023577 -
Phac3g00628 521 Pfam Phosphoribulokinase / Uridine kinase family 16 139 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00628 Phac-Chr3 5053549 5064929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00628 16 139 PRT Gene Family AT3G27190 29.134 8.43e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00628 K00876 - gmx:100781286 877.47