Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00552 ATGAGACTTGCTACGGCGGCACAAGGTTCCATGAGAGTGGACAGCGACAGCGCAAGGATTTGGAGCATCAGTGTTAGAGGGTATTCTGACATTTTGTTTTGGCATACACAGTGTGTCTTGGCCGCAGGTCCATTCTCTGGTGGGTCAATGAACCCTGCATGTGCTTTTGGCTCGGCAACCATTGCAGGCTCTTTCAGGAACCAAGCAGTGTATTGGGTTGGACCCTTGATTGGTGCCACCATAGCTGGTCTTCTTTATGACAATGTGCTGTTCCGTTCTTTTCCTACAGAGCTTTCAGAAGGAATTGGGATGTGA 315 0.4921 MRLATAAQGSMRVDSDSARIWSISVRGYSDILFWHTQCVLAAGPFSGGSMNPACAFGSATIAGSFRNQAVYWVGPLIGATIAGLLYDNVLFRSFPTELSEGIGM* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00552 104 Gene3D Glycerol uptake facilitator protein. 27 97 IPR023271 -
Phac3g00552 104 PANTHER AQUAPORIN-8 32 91 IPR034294 -
Phac3g00552 104 Pfam Major intrinsic protein 35 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac3g00552 104 SUPERFAMILY Aquaporin-like 31 97 IPR023271 -
Phac3g00552 104 PRINTS Major intrinsic protein family signature 32 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac3g00552 104 PRINTS Major intrinsic protein family signature 69 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00552 Phac-Chr3 4399896 4400671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00552 39 101 Major Intrinsic Protein MIP AT3G47440 69.841 3.41e-24 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00552 K09873 - gmx:100777983 118.627