Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00539 ATGTTGACAGTGTTTTATTATGCCCTGGCCTTCTCCTTTTTTGCATTCTTGGCATTGATGAAATGGAACAACTTAAGGTACTCAAGGGAAGGAATGCCTCCAGGCTCATTGGGTTGGCCTTTTGTTGGGGAGACTCTCAGATTTCTCACACAAGGACCAGATTTCATGAAAGGACGCAAATTAAGGCATGGAAGTCTCTTCAAAACACATGCATTGGGCTCTCCTATTGTGGTTAGCATGGATCCTGACATCAATAGATACGTACTCGTGAATGAAGCAAAGGGTTTCGTTCCTGGCTACCCCGATTCCATGAGGAAGATCCTAGGGACTAACATTGCTGAGGTTCATGGTGCAGAACACAAGCGAATCAGAGGGTCACTGTTATCTCTCATTGGTCCAATGGCAGTTAAGGATCATCTTTTGCCAGAAGTTGATGAGTTCATGAGCTCTTTCCTTCACAATTGGGATGGTAAAATAATCGATCTTCAAGAAAAAACTGTTGAGATGGCATTCTTTATTTCCATGAAAGCTGTGGTAGAAGATGAGCCAAACTCTTTCCTTGAGTCTTTTAAAGCCACATTTGATAAAATGGCACTAGCAACAATATCCTTGCCATTTAAAATTCCAGGAACTGAATATTATCGAGGGATGAAGGCTAGGGGAAAAGTGCTTACAATACTAAGAGAGCTCATAGCCAAGAGAAGAGCTTCTTCAGCAACTCATAACGACATTCTTGGAAAACTTGTGAGAAATGAGGATGGTAAATACAAGCTAGATGACGAAGAAATAATGGAGCAAATCATCACAATTTTATACTCAGGTTATGAAACAGTATCTACTACTACAATGATGGCTATCAAATACCTATGTGATAACCCTAACTTTCTACAGGCAGTAAGAGATGAGCATTTTGCAATCTTGCAAAAGAAATTGCCTGGGGAACGGATCAACTGGGATGACTACAAGAATATGAGTCAAACTCGTGCGGTGATACTTGAGACCATGAGATTGGCTAGTGTTGTCAGTGGAGTGATGAGGAGGACTGCTAATGATGTAGAATTGAATGGTTATATGATTCCAAAGGGATGGAGGGTTTATGTTTACACAAGGGAGACTAACTATGATCCCATCCTCTATGAAGAACCTCTTACTTTTAATCCAAGGAGATGGCTGGAGAAAGGGTTGGAGACTCATAATCACAACGTGCTATTTGGAGCAGGAGGCAGGGTGTGTCCTGGAAAGGAGTGGGGCATGCTTAAAGTCAGTATTTTTATTCACTACTTTGTGACTAGATACAGATGGGAAGAAGGACAGGGAAACAAGAAACTTGTGAAATTTCCAAGGGTGTTGGCACCAGAAGGACTACACATGAAGATCACAAAATACTAG 1389 0.4132 MLTVFYYALAFSFFAFLALMKWNNLRYSREGMPPGSLGWPFVGETLRFLTQGPDFMKGRKLRHGSLFKTHALGSPIVVSMDPDINRYVLVNEAKGFVPGYPDSMRKILGTNIAEVHGAEHKRIRGSLLSLIGPMAVKDHLLPEVDEFMSSFLHNWDGKIIDLQEKTVEMAFFISMKAVVEDEPNSFLESFKATFDKMALATISLPFKIPGTEYYRGMKARGKVLTILRELIAKRRASSATHNDILGKLVRNEDGKYKLDDEEIMEQIITILYSGYETVSTTTMMAIKYLCDNPNFLQAVRDEHFAILQKKLPGERINWDDYKNMSQTRAVILETMRLASVVSGVMRRTANDVELNGYMIPKGWRVYVYTRETNYDPILYEEPLTFNPRRWLEKGLETHNHNVLFGAGGRVCPGKEWGMLKVSIFIHYFVTRYRWEEGQGNKKLVKFPRVLAPEGLHMKITKY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00539 462 CDD CYP90-like 59 461 - -
Phac3g00539 462 Gene3D Cytochrome P450 23 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Phac3g00539 462 PRINTS E-class P450 group IV signature 54 77 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS E-class P450 group IV signature 324 340 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS E-class P450 group IV signature 357 371 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS E-class P450 group IV signature 373 391 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS E-class P450 group IV signature 411 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS E-class P450 group IV signature 264 290 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PANTHER CYTOCHROME P450 26 30 438 - -
Phac3g00539 462 SUPERFAMILY Cytochrome P450 25 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phac3g00539 462 Pfam Cytochrome P450 33 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00539 Phac-Chr3 4300684 4305465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00539 80 462 Cytochrome P450 AT5G38970 53.766 7.22e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00539 K09590 - gmx:100818004 796.193