Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00537 ATGCTCAGCTCGAGGCAATCCTTGTACATCTCTTTCTCTTCTTCTCCTTCTTCTTCTTCATTCTTTTGTATCATTCTCCTCCAACTTACGCTTCTCTATGGCATTGCCTTCTCTGCCAACCATGAAGCCTCAACTCTCTTCTCTTGGCTCCATACTTCTGCATCACCACCACCTCCTTCTTTCTCTAACTGGAACATCCTTCATTCCAATCCATGCAACTGGACATCCATAACATGCTCCTCACTAGGCTTTGTCACTGAAATCAACATACAATCCATCCCTCTAGAGCTTCCTATACCTTCCAACCTCTCTTCATTTCACTCTCTTCAAAAGCTTGTCTTATCTGATGCTAATCTAACTGGAACCATCCCTTCAGACATTGGTGATTGCTCTTCCCTCACTGTCATTGACCTCAGCTCTAACAATCTTGTTGGTTCAATTCCTGCAAGCATTGGAAAGCTCCAGAACCTTCAGAACTTGTCTTTGAACTCTAATCAGCTTACTGGAAGGATCCCAGTGGAGTTAAGCAACTGCATTGATTTAAAAAATCTTCTCCTTTTTGACAATCAGATAAGTGGGACTATCCCACATGAGCTGGGGAAGTTGTCACAACTTGAGTCTCTAAGAGCAGGAGGGAACAAAGATATAGTTGGGAAGATTCCTGAAGAGCTAGGAGAATGCAGCAATTTAACCGTGTTGGGACTGGCTGATACCAGAATATCTGGTTCTTTGCCTGCTTCTTTGGGTAAGCTCACAAAGCTTCAGACACTGTCCATCTATACCACCATGCTGTCTGGTGAAATTCCACCAGAGTTAGGTAACTGTTCTGAACTTGTTGACTTGTTCTTATATGAAAATAGTCTATCAGGGTCTATTCCATCTGAGCTTGGCAAGCTCAAGAAGCTGGAACAGTTGTTTTTTTGGCAGAATGGTCTTGTGGGGGCCATCCCAGAAGAGATTGGTAACTGTACAAGCTTGAGAAAATTTGATTTCTCCTTAAATTCTCTATCTGGGACTATACCTGTATCTGTGGGGGGTCTCTTGAATCTTGAGGAGTTTATGATTAGTGATAACAATGTGTCTGGTTCAATTCCTTCCAGTCTTTCAAATGCTAAAAATCTTCAACAGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTAATTCCACCAGAGCTTGGTCAGTTGTCAAACCTCATGGTGTTCTTTGCTTGGCAGAACCAGCTTGAGGGAAGCATTCCCTCCACTTTGGGGAACTGTAGTAATCTTCAAGCACTAGACTTGTCACGCAATGCACTCACTGGTAGCATTCCTGTTGGCCTATTCCAGCTCCAAAACCTCACAAAACTGCTTCTGATTTCCAATGACATATCAGGTTTCATACCAAATGAAATAGGCAGTTGCAGCTCTCTTATAAGGTTGAGGCTTGGAAACAACAGGATTACTGGTAGCATTCCCAAGACAATAGGCAAGCTAAAGAGCTTGAACTTTTTAGATCTCTCTGGGAACCGCCTCTCCGGTGTGGTGCCTGATGAGATTGGAAGCTGCTCTGAACTGCAAATGATAGACTTCAGCAGCAACAACTTAGAAGGTCCTCTGCCTAATTATTTGTCTTCACTATCAGCAGTTCAGGTGTTGGATGCATCTTCCAACAGGTTTTCAGGTCCTTTACCGGCAAGTTTGGGCCGTCTTGTTTCTCTGAGTAAGCTAATCCTAAGCAATAACTTATTTTCTGGGCCTATTCCTGCATCATTGAGCCTATGCTCAAATCTCCAACTGCTTGATCTTAGCAGCAACAACCTCAGTGGAAACATACCGGCTGAACTTGGCCGCATTGAGACTTTAGAAATTGCTCTTAATCTTAGTTGCAATTCACTCCGTGGAATAATCCCAGCTCAGATATCTTCTCTTAACAAGCTTTCCATATTGGACCTCTCACACAACCAGTTGGAAGGAGATTTGCAACCTCTTTCTGAGTTAGACAACCTTGTATCACTCAATGTTTCTTACAACAAATTTTCTGGCTGTCTCCCAGATAACAAGCTTTTCAGGCAGTTGACATCAAAAGACTTCACAGCAAATCAAGGGCTCTCATGCTTTGTGAAGGATTCTAGCAAGACTGGTATGTCACTGAACGGAAATGAAGTAAGGAAGTCGCAAAGGCTTAAGCTAGCCATTGGATTGCTGATAGCCTTAACAGTAATAATGATTGTTATGGGGATAACTGCTGTCTTAAAAGCAAGGAGAATCATCAGGGATGATGATTCAGAATTGGGTGACTCATGGCCATGGCAATTCATACCATTTCAGAAGCTAAACTTTTCAGTGGAACAAATACTGAGATGTTTAGTTGATAGAAATATTATTGGAAAGGGATGTTCTGGTGTTGTATATAGAGCGGAAATGGACAATGGTGAAGTCATTGCTGTGAAGAAATTGTGGCCAACAACTATTGACGCAGAAGAGGCATTTAAGGAAGAAAAAAGTGGAGTTCGTGATTCATTCTCAGCTGAGGTCAAGACCCTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGTTGTTGGAACAGACAAACGAGATTGCTTATTTTCGATTACATGCCGAATGGAAAATATGGCTATATGATGAAGATTACAGAGAAGAGTGATATTTATAGCTATGGAGTAGTGTTGTTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACCATCCCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAAGGGTCTTGAAGTGCTTGATCCTAGCTTACTCTCTAGACCACAATCAGAAATAGAGGAAATGATGCAGGCATTGGGAATAGCATTATTGTGTGTGAACTCATCTCCTGATGAAAGGCCAACAATGAGAGATATTGCCGCTATGCTGAAGGAGATAAAGCATGAAAGGGAGGAGTATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATGGTGCATATGGGAATAAAAACTCTGGTGGAGTTCTGCCAATAGCTTCGTCATCAGTACCAGCCATGCAAACTTTGAAAACAAAAAGCAATCACTCAAGCTTCTCTGTGTCTTCTCTGCTCCATTCATCTTCAAGTGTCAAGATGGGTTCCAAATGA 3132 0.4218 MLSSRQSLYISFSSSPSSSSFFCIILLQLTLLYGIAFSANHEASTLFSWLHTSASPPPPSFSNWNILHSNPCNWTSITCSSLGFVTEINIQSIPLELPIPSNLSSFHSLQKLVLSDANLTGTIPSDIGDCSSLTVIDLSSNNLVGSIPASIGKLQNLQNLSLNSNQLTGRIPVELSNCIDLKNLLLFDNQISGTIPHELGKLSQLESLRAGGNKDIVGKIPEELGECSNLTVLGLADTRISGSLPASLGKLTKLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENSLSGSIPSELGKLKKLEQLFFWQNGLVGAIPEEIGNCTSLRKFDFSLNSLSGTIPVSVGGLLNLEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSNLMVFFAWQNQLEGSIPSTLGNCSNLQALDLSRNALTGSIPVGLFQLQNLTKLLLISNDISGFIPNEIGSCSSLIRLRLGNNRITGSIPKTIGKLKSLNFLDLSGNRLSGVVPDEIGSCSELQMIDFSSNNLEGPLPNYLSSLSAVQVLDASSNRFSGPLPASLGRLVSLSKLILSNNLFSGPIPASLSLCSNLQLLDLSSNNLSGNIPAELGRIETLEIALNLSCNSLRGIIPAQISSLNKLSILDLSHNQLEGDLQPLSELDNLVSLNVSYNKFSGCLPDNKLFRQLTSKDFTANQGLSCFVKDSSKTGMSLNGNEVRKSQRLKLAIGLLIALTVIMIVMGITAVLKARRIIRDDDSELGDSWPWQFIPFQKLNFSVEQILRCLVDRNIIGKGCSGVVYRAEMDNGEVIAVKKLWPTTIDAEEAFKEEKSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRQTRLLIFDYMPNGKYGYMMKITEKSDIYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKKGLEVLDPSLLSRPQSEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANGAYGNKNSGGVLPIASSSVPAMQTLKTKSNHSSFSVSSLLHSSSSVKMGSK* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00537 1043 Gene3D Ribonuclease Inhibitor 533 616 IPR032675 -
Phac3g00537 1043 Gene3D Ribonuclease Inhibitor 437 532 IPR032675 -
Phac3g00537 1043 Gene3D Ribonuclease Inhibitor 154 244 IPR032675 -
Phac3g00537 1043 Gene3D Ribonuclease Inhibitor 617 704 IPR032675 -
Phac3g00537 1043 SUPERFAMILY L domain-like 405 677 - -
Phac3g00537 1043 Gene3D Ribonuclease Inhibitor 341 436 IPR032675 -
Phac3g00537 1043 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 872 971 - -
Phac3g00537 1043 Gene3D Transferase(Phosphotransferase) domain 1 865 987 - -
Phac3g00537 1043 Gene3D Ribonuclease Inhibitor 245 340 IPR032675 -
Phac3g00537 1043 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 214 437 - -
Phac3g00537 1043 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Phac3g00537 1043 Pfam Leucine rich repeat 618 672 IPR001611 GO:0005515
Phac3g00537 1043 Pfam Protein kinase domain 785 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00537 1043 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 438 532 - -
Phac3g00537 1043 Gene3D Phosphorylase Kinase; domain 1 768 864 - -
Phac3g00537 1043 ProSitePatterns Protein kinases ATP-binding region signature. 788 811 IPR017441 GO:0005524
Phac3g00537 1043 Gene3D Ribonuclease Inhibitor 42 153 IPR032675 -
Phac3g00537 1043 FunFam Putative LRR receptor-like serine/threonine-protein kinase 617 702 - -
Phac3g00537 1043 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 765 868 - -
Phac3g00537 1043 Pfam Leucine rich repeat N-terminal domain 40 80 IPR013210 -
Phac3g00537 1043 PRINTS Leucine-rich repeat signature 494 507 - -
Phac3g00537 1043 PRINTS Leucine-rich repeat signature 636 649 - -
Phac3g00537 1043 SUPERFAMILY Protein kinase-like (PK-like) 758 976 IPR011009 -
Phac3g00537 1043 FunFam LRR receptor-like serine/threonine-protein kinase 537 612 - -
Phac3g00537 1043 Pfam Protein tyrosine and serine/threonine kinase 878 968 IPR001245 GO:0004672|GO:0006468
Phac3g00537 1043 SUPERFAMILY RNI-like 111 504 - -
Phac3g00537 1043 SMART LRR_typ_2 347 371 IPR003591 -
Phac3g00537 1043 SMART LRR_typ_2 154 178 IPR003591 -
Phac3g00537 1043 SMART LRR_typ_2 106 130 IPR003591 -
Phac3g00537 1043 SMART LRR_typ_2 491 515 IPR003591 -
Phac3g00537 1043 SMART LRR_typ_2 299 323 IPR003591 -
Phac3g00537 1043 SMART LRR_typ_2 563 587 IPR003591 -
Phac3g00537 1043 SMART LRR_typ_2 419 443 IPR003591 -
Phac3g00537 1043 SMART LRR_typ_2 659 684 IPR003591 -
Phac3g00537 1043 SMART LRR_typ_2 636 655 IPR003591 -
Phac3g00537 1043 ProSiteProfiles Leucine-rich repeat profile. 638 660 IPR001611 GO:0005515
Phac3g00537 1043 ProSiteProfiles Protein kinase domain profile. 782 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00537 1043 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 39 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00537 Phac-Chr3 4277873 4281786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00537 872 988 Receptor kinase-like Gene Family AT5G56040 48.062 6.24e-30 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac3g00537 PK_Tyr_Ser-Thr 3.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00537 - - gmx:100818541 1494.18