Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00533 ATGAACCACGACGACAAACTCACCATGGACCTGGTTCCACCATCTGAACACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTCCTCGCGGGGTTTTACAGTAATGCCAAAAAGGGACAAGCATCGTCTTCATCTTCCTCACCAACCACATCCAACGAGTCAGTGTCCCCAAAAGCAGCATCTTTTGTTGTGAAACCACCTGAGAAAAAGCACCGTCTCCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCAAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCAGCGAAAAATTGGGCAAGGTTCATTCCAAATTCACCAACCAGCTCAGTTTCTGCAAGTAAAGTTAATACAGATTGA 390 0.4692 MNHDDKLTMDLVPPSEHLCYVRCNFCNTVLAGFYSNAKKGQASSSSSSPTTSNESVSPKAASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPTSSVSASKVNTD* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00533 129 Pfam YABBY protein 42 112 IPR006780 GO:0007275
Phac3g00533 129 Gene3D High mobility group box domain 45 116 IPR036910 -
Phac3g00533 129 MobiDBLite consensus disorder prediction 39 76 - -
Phac3g00533 129 PANTHER PROTEIN YABBY 6-RELATED 14 31 IPR006780 GO:0007275
Phac3g00533 129 SUPERFAMILY HMG-box 56 110 IPR036910 -
Phac3g00533 129 MobiDBLite consensus disorder prediction 39 59 - -
Phac3g00533 129 FunFam Protein CRABS CLAW 45 116 - -
Phac3g00533 129 CDD HMG-box_SF 73 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00533 Phac-Chr3 4183828 4186141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00533 1 124 C2C2-YABBY Transcription Factor Family AT1G69180 45.238 3.95e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac3g00533 YABBY 2.5e-30 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00533 K25796 - gmx:100819079 231.106