Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00532 ATGAACCACGACGACAAACTCACCATGGACCTGGTTCCACCATCTGAACACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTCCTCGCGGTTGGTATTCCATGCAAGAGGCTGTTAGACACTGTGACAGTGAAGTGTGGCCACTGCAGCAACCTCTCCTTTCTGAGCACCAGACCCCCTAATTCTCAAAACCAAAGCATTGATCACACCCTCAGTCTCCAGCAGGGGTTTTACAGTAATGCCAAAAAGGGACAAGCATCGTCTTCATCTTCCTCACCAACCACATCCAACGAGTCAGTGTCCCCAAAAGCAGCATCTTTTGTTGTGAAACCACCTGAGAAAAAGCACCGTCTCCCATCTGCTTACAATCGTTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCAAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCAGCGAAAAATTGGGCAAGGTTCATTCCAAATTCACCAACCAGCTCAGTTTCTGCAAGTAAAGTTAATACAGATTGA 525 0.4781 MNHDDKLTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPNSQNQSIDHTLSLQQGFYSNAKKGQASSSSSSPTTSNESVSPKAASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPTSSVSASKVNTD* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00532 174 MobiDBLite consensus disorder prediction 81 113 - -
Phac3g00532 174 Pfam YABBY protein 14 157 IPR006780 GO:0007275
Phac3g00532 174 FunFam Protein CRABS CLAW 90 161 - -
Phac3g00532 174 PANTHER PROTEIN YABBY 6-RELATED 14 164 IPR006780 GO:0007275
Phac3g00532 174 CDD HMG-box_SF 118 154 - -
Phac3g00532 174 Gene3D High mobility group box domain 91 161 IPR036910 -
Phac3g00532 174 MobiDBLite consensus disorder prediction 81 104 - -
Phac3g00532 174 SUPERFAMILY HMG-box 101 155 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00532 Phac-Chr3 4183828 4186141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00532 1 169 C2C2-YABBY Transcription Factor Family AT1G69180 63.372 6.98e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac3g00532 YABBY 6.8e-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00532 K25796 - gmx:100819079 333.954