Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00525 ATGGAATCTTGGAGTTATGTCCCTGAAGAGAAAGGCTATTTGTTTTCTGATGAAATGGATTTTTCACTTGATGCTTTTATGAGAAGTCGAAGAACATTGGTTGAATGGGACAACAAATCCAACTTTGAGAGAGATGGATTTAATTCAGACAGAGAGGTAGTTAAAAGCATGGAGTTTGTGGACTTGGGATTCCCTGACTTGTTGCAGAAGTCTTTTCATGGTAGCCAACCTCTAGAGACTTCAAGCTATGAACTAGATAGTAATTCTAGTAAAAGAGGGAATTCCTCCACACATGTCATTGCTTTGGATTCTACTATGGGGGAAGAAGAATCTGATTCAAAGCATTTAAGTTCTCCAGTTGAAGCAAAGATTCATGATTCTTCACTGATTGATCTGAAGCTAGGGAGATTAGCAGATTGTAAAGGTGCAAGCAGTGATAAAGTTACAAAAGAAGGGTTTACTTTGACATCTATACATCAAACCACGCTTTCAAAGAGAGCTCGCACTTCCAGCTTATCTGCACAGGCTCCTGTATGTCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCAAAAGATTACCACAAAAGGCATAAAGTTTGTGATGCTCACTCCAAAACAGCCAAAGTTATTGTAAATGGCCTTGAACAAAGGTTTTGTCAGCAGTGCAGCAGGTTCCATGTGCTAGCTGAGTTTGATGATGGCAAGCGCAGTTGTCGCAGGCGCCTAGCGGGACACAATGAACGCCGGAGGAAACCTCAATTTGATTACATGACTGGTAAACAGCACAAGATTCTTCAATCATATCAAGGTATGAAAATGTATCTGTTACTACATTCTTTGGCATTAGATAAGACTTAA 861 0.3984 MESWSYVPEEKGYLFSDEMDFSLDAFMRSRRTLVEWDNKSNFERDGFNSDREVVKSMEFVDLGFPDLLQKSFHGSQPLETSSYELDSNSSKRGNSSTHVIALDSTMGEEESDSKHLSSPVEAKIHDSSLIDLKLGRLADCKGASSDKVTKEGFTLTSIHQTTLSKRARTSSLSAQAPVCQVYGCNMDLSSSKDYHKRHKVCDAHSKTAKVIVNGLEQRFCQQCSRFHVLAEFDDGKRSCRRRLAGHNERRRKPQFDYMTGKQHKILQSYQGMKMYLLLHSLALDKT* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00525 286 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 99 254 IPR044817 GO:0003677
Phac3g00525 286 FunFam Squamosa promoter-binding-like protein 14 170 240 - -
Phac3g00525 286 Gene3D - 169 240 IPR036893 GO:0003677|GO:0005634
Phac3g00525 286 SUPERFAMILY SBT domain 177 258 IPR036893 GO:0003677|GO:0005634
Phac3g00525 286 ProSiteProfiles Zinc finger SBP-type profile. 176 253 IPR004333 GO:0003677
Phac3g00525 286 Pfam SBP domain 179 252 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00525 Phac-Chr3 4156227 4162360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00525 1 272 SBP-box Gene Family AT1G69170 43.015 1.46e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac3g00525 SBP 5.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00525 - - vum:124825483 529.25