Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00484 ATGAGAGGTGATAATTTCTCTCTGGTAACAGGACTCAACAGGTGTGGCAAAAGTTGCAGGTTAAGGTGGACCAACTACTTGAGGCCTGACATTAAAAGAGGAAAGTTTTCCAAAGAAGAAGAACAAACAATTCTGGATCTCCATGCCATCCTTGGAAACAAATGGTCCGCAATAGCAAGTCACATACCTGGTAGGACAGATAATGAAATCAAGAATTTTTGGAACACTCATCTGAAGAAGAAGCTGATTCAAATGGGTTATGACCCAATGACACACCAGCCTCGAACCGATGATATCCTCTCAGGCTTGTCTCATCTCATACCACTGGCTAACCTGAAAGAACTTTTGGACCATCACCATCAGCCATGGGAACAAAGCCTTGCAAGGCTTCAAGAAGAGACCATCCAATTAGCCAGGCTCCAAAGCTTACAGCAACACCTCTTGCAGCCACAAGCTTCGTTCACTGAGGCTGATCTTAACGCAGTTAATAGTATAAGAAACAGTACCATCATGATGAACAACGACACCGTCAATGTTTCAAATGATACTAGTGCTATGTCTTCTACCCCTTTCTCTTACATGCCTGAGTTGAAAACACCACCTTCTTGTTCCGTTGAAGCACCATTAAGTAATAAGAACATGGTTCAATTACAACAAGGAGAAAGTTACCCTAAATCTCCCTGGCTTTTTTCGTGTTCAGGCACTACCCCTTCTTCTCCTTCTTCCCATGTGGTTCCACCAGTGACGTTGGAGGTTTCATTGACTAATGTGGAAGATAATTGCATTAATTGGCCAGAGATCCTGCTAGAGGACCCTTTGTTCAAAATGATTTCCTAG 837 0.4289 MRGDNFSLVTGLNRCGKSCRLRWTNYLRPDIKRGKFSKEEEQTILDLHAILGNKWSAIASHIPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDDILSGLSHLIPLANLKELLDHHHQPWEQSLARLQEETIQLARLQSLQQHLLQPQASFTEADLNAVNSIRNSTIMMNNDTVNVSNDTSAMSSTPFSYMPELKTPPSCSVEAPLSNKNMVQLQQGESYPKSPWLFSCSGTTPSSPSSHVVPPVTLEVSLTNVEDNCINWPEILLEDPLFKMIS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00484 278 CDD SANT 35 78 IPR001005 -
Phac3g00484 278 ProSiteProfiles Myb-like domain profile. 28 78 IPR001005 -
Phac3g00484 278 Pfam Myb-like DNA-binding domain 33 78 IPR001005 -
Phac3g00484 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 10 182 - -
Phac3g00484 278 SUPERFAMILY Homeodomain-like 13 86 IPR009057 -
Phac3g00484 278 SMART sant 32 80 IPR001005 -
Phac3g00484 278 FunFam Transcription factor MYB39 35 96 - -
Phac3g00484 278 Gene3D - 7 32 - -
Phac3g00484 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 82 IPR017930 -
Phac3g00484 278 Gene3D - 35 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00484 Phac-Chr3 3657635 3659357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00484 9 277 MYB Transcription Factor Family AT5G10280 46.488 1.14e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac3g00484 Myb_DNA-binding 4.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00484 K09422 - gmx:100785374 390.578