Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00478 ATGTCTTCCGCTAAGAACAAGGGAAACGCTGTCGGCGCCAAAACGGCACGAGCGTGCGACAGCTGCATGAGAAATCGAGCGCGTTGGTACTGTGCCGCCGACGACGCGTTCCTCTGCCAAGCTTGCGACTCTTCCGTTCACTCAGCGAACCCATTAGCGCGTAGACACAACCGCGTTCGCTTGAAAATCGTTTCATACATCGAAGCTAACAATAAATCATTTTCTGGAATGGGTAACGGTCCATCGTGGCACAAAGGGTTCACCAAGAAACCCCGAACGCCACGTCACGGGAAGAACGCTAATAAGGCTCTGAAGAATCCCTTCGATGTGGTACCCGAAGACACAAATTCGAACTCCCATGAAGAGAGCGTGGATGAGGTTCTTTATAGAGTGCCCGCAACTCCTTCGGCAGAGCAAGGGGTATCCGTGAGCGATGAGAGGAAAGTTGATTTGTTAGGATGTGAAAGCGCGTTTGAGATTGCTGAGTTTAGTGCTGATGTTGAGAGTTTGTTGAGGGAGGGACTGGAGAGTGAGTTTGTGGGAATGGAAGAGTTGGGGCTGGTGGGTACCAATGAGGTGGAGGAGCATGCTTCGTGGGAGTGTTGTGTGGGTGGTGGGAATATGAAGGTGGAGGAAAAGGTTATTGGGTTGGATAAGAGGCAAGAAGTAGTGAAAGAGGATGATCAGCGAAAGAAGAAGAAGATCTTATTGTTGCGGTTAGATTATGAGGCTGTAATCACTGCTTGGACCAGCCAAAGCTCGCTGTGGACTACTGCTCATAAACCAGACTTGGCCACCACGCACTTCTGGCCTCATTGCATGAGAACGTATGGAGTGGAGTTTGAGCATCCTTGTGGGGAATTGTTTGGGTGTGATTCAGGAAAGGTAGACGGTGGAAGAGAAGCAAGAGTGTCAAGATATAGAGAAAAGCGACGTAAAAGGTTGTTCTCGAAGAAAATAAGGTACTGCATCTTGGATTGTAGGTTTAATCATTGGCCCAACATTGGGAGGTTATTTGGCTTATTTGGCTCAGGTTATTATGCAAATTTTTTGACATATGGATTTGTGTATGTTCATAGAATTGATACCTAA 1092 0.4762 MSSAKNKGNAVGAKTARACDSCMRNRARWYCAADDAFLCQACDSSVHSANPLARRHNRVRLKIVSYIEANNKSFSGMGNGPSWHKGFTKKPRTPRHGKNANKALKNPFDVVPEDTNSNSHEESVDEVLYRVPATPSAEQGVSVSDERKVDLLGCESAFEIAEFSADVESLLREGLESEFVGMEELGLVGTNEVEEHASWECCVGGGNMKVEEKVIGLDKRQEVVKEDDQRKKKKILLLRLDYEAVITAWTSQSSLWTTAHKPDLATTHFWPHCMRTYGVEFEHPCGELFGCDSGKVDGGREARVSRYREKRRKRLFSKKIRYCILDCRFNHWPNIGRLFGLFGSGYYANFLTYGFVYVHRIDT* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00478 363 ProSiteProfiles CCT domain profile. 300 342 IPR010402 GO:0005515
Phac3g00478 363 SMART bboxneu5 14 61 IPR000315 GO:0008270
Phac3g00478 363 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 4 322 - -
Phac3g00478 363 MobiDBLite consensus disorder prediction 78 125 - -
Phac3g00478 363 CDD Bbox1_BBX-like 18 61 - -
Phac3g00478 363 Pfam B-box zinc finger 16 59 IPR000315 GO:0008270
Phac3g00478 363 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00478 Phac-Chr3 3600740 3604834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00478 5 322 C2C2-CO-like Transcription Factor Family AT1G25440 39.119 1.52e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac3g00478 zf-B_box 8.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00478 - - vun:114173052 467.618