Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00476 ATGTGTCCTTTCTCTCAGTATTCCACTGCACACAGAAGAACCATGAAGATTAGTTGTAATGGGTGTCGCATTCTTCGCAAAGGTTGTACTGAGGACTGTGTTATTAGGCCATGCCTTGAATGGATAAACTCTTCTGAGGCACAAGCCAATGCCACCCTTTTCCTTTCTAAGTTCTATGGTCGTGCCGGTTTGCTCAACCTCATCAATGCTGCCCCACAACACCATCGCACTGATGTGTTCAAGTCACTGATGTATGAGGCGTGTGGGAGAATCATGAACCCAACATTTGGATCAGTAGGTTTGTTTTGGAGTGGTGAGTGGGCCCAATGCCAAGCTGCTGTTGATGCTGTGCTAGCTGGGTCCCAGATCAATGTGATGACAAGTTCTCATTCACAAGTGATGGTGGCACATGGCAGTGAGTATGCTTCCAAACTCCTTGACATACGTCATGTTGTCAAAGATGCCAACATGGACAAGGTAAAAGGAAAATCTAAGAAGCCCAAAAGAACTGAGAATGTTATCATGCCAATGTCTCATGTGGGTTTGGTCAACTCAGCTACATTATGGAACCCAATTTTAAGCCATGAGCCAAGAAGGTTAGAGGGTGGTGGTGAGGAAATAGTGAGGGCTATGTTGTTGAGCCAAGACAAGCCAAGTATTGATTTGGAGCTCACTCTTGGCTAG 684 0.4561 MCPFSQYSTAHRRTMKISCNGCRILRKGCTEDCVIRPCLEWINSSEAQANATLFLSKFYGRAGLLNLINAAPQHHRTDVFKSLMYEACGRIMNPTFGSVGLFWSGEWAQCQAAVDAVLAGSQINVMTSSHSQVMVAHGSEYASKLLDIRHVVKDANMDKVKGKSKKPKRTENVIMPMSHVGLVNSATLWNPILSHEPRRLEGGGEEIVRAMLLSQDKPSIDLELTLG* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00476 227 ProSiteProfiles LOB domain profile. 17 123 IPR004883 -
Phac3g00476 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 17 165 - -
Phac3g00476 227 Pfam Lateral organ boundaries (LOB) domain 18 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00476 Phac-Chr3 3596554 3598061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00476 15 196 AS2 family AT3G02550 49.474 5.71e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac3g00476 LOB 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00476 - - vum:124830139 359.762