Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00419 ATGAAATCTAGTTTTAAGGGAACAAGAAGTTGTGTTTTAATGGACAATAATGCCTTGGGTATTCTCAAACTTCGAATCAAAAGAGGCATTGATCTTGCAATTCGCGATGCACGTGCAAGTGATCCATATGTCGTTGTTAAGATGGGTGATCAGCATATGAAGACACGTGTTATAAAAAACAACTGCAATCCTACGTGGAATGAAGAAATGACCCTTTTTGTAAAGAACGTTGAAACCCCAATACATTTGACAGTTTTTGACAAAGACACTTTCACTGTGGATGACAAAATGGGCGAGGCAGAGATAGACTTTAAACCCTTTCTTAAGTGTAAAAAGATGGAAATGAAAAACCTCCCAAATGGTTGTGCACTGAAGAGGATCCAACCAAGTAGAAGTAATTACCTTTCTGAAGAGAGCAGCTGCATTTGGAAAGATGGTGATGTTATCCAAGAAATGATTTTGAGATTGAAAAATGTTGAGAGGGGAGAACTGGTTGTGGAAATTGAGTGGGTTGATGTTATTGGTTTTAGGGGCTTATCACATGTAAAACTTTGA 555 0.3784 MKSSFKGTRSCVLMDNNALGILKLRIKRGIDLAIRDARASDPYVVVKMGDQHMKTRVIKNNCNPTWNEEMTLFVKNVETPIHLTVFDKDTFTVDDKMGEAEIDFKPFLKCKKMEMKNLPNGCALKRIQPSRSNYLSEESSCIWKDGDVIQEMILRLKNVERGELVVEIEWVDVIGFRGLSHVKL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00419 184 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 20 113 IPR035892 -
Phac3g00419 184 CDD C2_ArfGAP 19 162 - -
Phac3g00419 184 Pfam C2 domain 20 108 IPR000008 -
Phac3g00419 184 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 17 174 IPR044562 -
Phac3g00419 184 SMART C2_3c 21 116 IPR000008 -
Phac3g00419 184 Gene3D C2 domain 14 175 IPR035892 -
Phac3g00419 184 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00419 Phac-Chr3 3026075 3030182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00419 53 181 C2H2 Transcription Factor Family AT1G70790 61.069 2.10e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00419 - - gmx:100788395 269.626