Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00418 ATGTGTCTACAAAATTTTTTTTTATCTTTTTGGGAAAGATTGTTTTGGAGGGACGTTGTGTTTTCAATATCAAATACATGTTTTGGATGGAAGAGTTTTGGGTCATTGGATAATTTTGGTGTGAAGATTATTCTCATATGTATGCAGAAGCTAAAGACTAGTGTTATAAAAAACAACTGCAATCCTGAGTGGAACGAAGAAAGGACCATTTCTATAAAGGACGTTACAACCCCAATACATCTGGCAGTTTATGACAAAGACACATTCTCAGGGGATGACAAAATGGGAGATGCAGACATAGACTTAAAACCATATATTCAGTGTGTGCAAAGAGGGTTAACTAACCTCCCAGAGGGTTCTGTAGTGGCCACGATTCAACCAGATGAAACTAATTGCCTTGCCAAAGAAAGCACTTGCATTTGGCGAGACCAAAACATCATCCAAGAAATGATTTTGAGACTTAGAAATGTTGAGAGTGGGGAAGTAGTTGTCGAAATTCAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACATCTACAACTTTAA 549 0.377 MCLQNFFLSFWERLFWRDVVFSISNTCFGWKSFGSLDNFGVKIILICMQKLKTSVIKNNCNPEWNEERTISIKDVTTPIHLAVYDKDTFSGDDKMGDADIDLKPYIQCVQRGLTNLPEGSVVATIQPDETNCLAKESTCIWRDQNIIQEMILRLRNVESGEVVVEIQWVDVIGCKGLSHLQL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00418 182 ProSiteProfiles C2 domain profile. 1 115 IPR000008 -
Phac3g00418 182 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 35 103 IPR035892 -
Phac3g00418 182 Gene3D C2 domain 31 173 IPR035892 -
Phac3g00418 182 Pfam C2 domain 33 104 IPR000008 -
Phac3g00418 182 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 48 174 IPR044562 -
Phac3g00418 182 SMART C2_3c 19 114 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00418 Phac-Chr3 3018708 3020522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00418 50 179 C2H2 Transcription Factor Family AT1G70790 57.576 4.85e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00418 - - vum:124825278 237.269