Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00417 ATGGACAATAGCATTCTGGGTCTTCTCAAACTTCGAATTAAAAGAGGTATTGATCTTGCAATTCGCGATGCCATTAAAGGACGTGCCAGTGACCCTTACGTCGTCGTCAACATGGGCGATCAGAAGCTAAAGACTAGTGTTATAAAAAACAACTGCAATCCTGAGTGGAACGAAGAAAGGACCATTTCTATAAAGGACGTTACAACCCCAATACATCTGGCAGTTTATGACAAAGACACATTCTCAGGGGATGACAAAATGGGAGATGCAGACATAGACTTAAAACCATATATTCAGTGTGTGCAAAGAGGGTTAACTAACCTCCCAGAGGGTTCTGTAGTGGCCACGATTCAACCAGATGAAACTAATTGCCTTGCCAAAGAAAGCACTTGCATTTGGCGAGACCAAAACATCATCCAAGAAATGATTTTGAGACTTAGAAATGTTGAGAGTGGGGAAGTAGTTGTCGAAATTCAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACATCTACAACTTTAA 525 0.4133 MDNSILGLLKLRIKRGIDLAIRDAIKGRASDPYVVVNMGDQKLKTSVIKNNCNPEWNEERTISIKDVTTPIHLAVYDKDTFSGDDKMGDADIDLKPYIQCVQRGLTNLPEGSVVATIQPDETNCLAKESTCIWRDQNIIQEMILRLRNVESGEVVVEIQWVDVIGCKGLSHLQL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00417 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 95 IPR035892 -
Phac3g00417 174 Gene3D C2 domain 5 166 IPR035892 -
Phac3g00417 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 166 IPR044562 -
Phac3g00417 174 SMART C2_3c 8 106 IPR000008 -
Phac3g00417 174 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Phac3g00417 174 Pfam C2 domain 8 96 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00417 Phac-Chr3 3017722 3020522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00417 42 171 C2H2 Transcription Factor Family AT1G70790 57.576 7.54e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00417 - - gmx:100784381 288.5