Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac3g00417 | ATGGACAATAGCATTCTGGGTCTTCTCAAACTTCGAATTAAAAGAGGTATTGATCTTGCAATTCGCGATGCCATTAAAGGACGTGCCAGTGACCCTTACGTCGTCGTCAACATGGGCGATCAGAAGCTAAAGACTAGTGTTATAAAAAACAACTGCAATCCTGAGTGGAACGAAGAAAGGACCATTTCTATAAAGGACGTTACAACCCCAATACATCTGGCAGTTTATGACAAAGACACATTCTCAGGGGATGACAAAATGGGAGATGCAGACATAGACTTAAAACCATATATTCAGTGTGTGCAAAGAGGGTTAACTAACCTCCCAGAGGGTTCTGTAGTGGCCACGATTCAACCAGATGAAACTAATTGCCTTGCCAAAGAAAGCACTTGCATTTGGCGAGACCAAAACATCATCCAAGAAATGATTTTGAGACTTAGAAATGTTGAGAGTGGGGAAGTAGTTGTCGAAATTCAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACATCTACAACTTTAA | 525 | 0.4133 | MDNSILGLLKLRIKRGIDLAIRDAIKGRASDPYVVVNMGDQKLKTSVIKNNCNPEWNEERTISIKDVTTPIHLAVYDKDTFSGDDKMGDADIDLKPYIQCVQRGLTNLPEGSVVATIQPDETNCLAKESTCIWRDQNIIQEMILRLRNVESGEVVVEIQWVDVIGCKGLSHLQL* | 175 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac3g00417 | 174 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 95 | IPR035892 | - | |
| Phac3g00417 | 174 | Gene3D | C2 domain | 5 | 166 | IPR035892 | - | |
| Phac3g00417 | 174 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 5 | 166 | IPR044562 | - | |
| Phac3g00417 | 174 | SMART | C2_3c | 8 | 106 | IPR000008 | - | |
| Phac3g00417 | 174 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Phac3g00417 | 174 | Pfam | C2 domain | 8 | 96 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac3g00417 | Phac-Chr3 | 3017722 | 3020522 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Phac3g00417 | 42 | 171 | C2H2 Transcription Factor Family | AT1G70790 | 57.576 | 7.54e-51 | 158 |