Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00416 ATGGACAATAGCATTCTGGGTCTTCTCAAACTTCGAATTAAAAGAGGTATTGATCTTGCAATTCGCGATGCCATTAAAGGACGTGCCAGTGACCCTTACGTCGTCGTCAACATGGGCGATCAGATTATTCTCATATGTATGCAGAAGCTAAAGACTAGTGTTATAAAAAACAACTGCAATCCTGAGTGGAACGAAGAAAGGACCATTTCTATAAAGGACGTTACAACCCCAATACATCTGGCAGTTTATGACAAAGACACATTCTCAGGGGATGACAAAATGGGAGATGCAGACATAGACTTAAAACCATATATTCAGTGTGTGCAAAGAGGGTTAACTAACCTCCCAGAGGGTTCTGTAGTGGCCACGATTCAACCAGATGAAACTAATTGCCTTGCCAAAGAAAGCACTTGCATTTGGCGAGACCAAAACATCATCCAAGAAATGATTTTGAGACTTAGAAATGTTGAGAGTGGGGAAGTAGTTGTCGAAATTCAGTGGGTTGATGTTATTGGTTGCAAGGGCTTATCACATCTACAACTTTAA 546 0.4084 MDNSILGLLKLRIKRGIDLAIRDAIKGRASDPYVVVNMGDQIILICMQKLKTSVIKNNCNPEWNEERTISIKDVTTPIHLAVYDKDTFSGDDKMGDADIDLKPYIQCVQRGLTNLPEGSVVATIQPDETNCLAKESTCIWRDQNIIQEMILRLRNVESGEVVVEIQWVDVIGCKGLSHLQL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00416 181 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 173 IPR044562 -
Phac3g00416 181 Gene3D C2 domain 5 172 IPR035892 -
Phac3g00416 181 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 102 IPR035892 -
Phac3g00416 181 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Phac3g00416 181 SMART C2_3c 8 113 IPR000008 -
Phac3g00416 181 Pfam C2 domain 8 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00416 Phac-Chr3 3017722 3020522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00416 49 178 C2H2 Transcription Factor Family AT1G70790 57.576 1.05e-50 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00416 - - gmx:100784381 281.567