Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00412 ATGTCGCGCAACAAAGTTGTTGAGATGACAACAGACTGCATCCTGGTAGACAAAGTTAGGGTTCACAGTTTGAAACTTGTTTGGTTGTTTCCAATGGAGGAAGGGAATGCAGAGCCTCGTGTGGATGCAAATCCAAATCCCAGTCACGAAGAAACACAGTGTTTGGATTCTGGCCGTGTTCAAGAAGTGAAAAAGAAGCGCGGCAGAAAAAGTAAAAAGGAAAAAGAGGAGATGGAAAAGAAGAAAATGTTAGACGCTACTGCTGCCGAAGAGGGTGGGGTTTCCGAGAAGAGACCGATTAGGAAAAGAAAGAACGATGATGGAAATGGTGAGCTTGGAATGTCTGGCGCTGAGAAACCGTATAGGGGTCGTAAACAAGAGATGATGTCAAAAAAAGTCACCAAGAGAAGAGCTAAGTATGGTGAAGAGGAGCCCTTAACATGCCACCAATGTAAGAGAAACGATAAAGGTCGTGTTGTGAGGTGCTCCACCTGTAACAAGAAAAGATTTTGCCTATTCTGTATACGAGCTTGGTACCCGCATTTGAAAGAGGAGGATATTGCTGAGGCATGTCCTGTGTGCCGTGGTAATTGCAATTGCAAAGCATGCCTGAGCTCTGTTGGACTTATTAATCAAATGAAAAAGGCAACGATGAAAAAGGGCGAGAAGGTTGAACTCTCTTTGTATTTGCTGCAAGTACTTCTTCCGTTTATAAGGCAGCTGGATGAAGAACAGATGATTGAGAATGAGACAGAAGCTAAGATACAAGGGCTCTCAGTCTCCGAGCTAAATATAGTTAAGGCAGATTTCTCTTTACAAGAGCGTGTGTACTGTGACAACTGCAAAACATCAATATTCGATTACCACAGAAGCTGCACAAAATGCTCTTTTGACCTTTGTCTCATCTGTTGCCGTGAGCTTCGTAGTGGGCAGCTTGTAGGTGGTGCAGATCCAATTGAGTTGGAGTTTGTTTGGCAAGGTCGTGGTTACTTGCATGCTGAAAAAGCAATTGAAAAGGTAGAACAAATTGAATCAAATGCTGGTGCTAAGCCCGAGGGTCACGAATGGTCAAGATCCGGGTGGCATTCACATAGTAATGGTAGCATTCCTTGTCCAAAAGTCAACGATGAATGCAACCATGGTTTTCTGGAACTGAGAAGTATATTGGGTCAACATTTTATCTCAGAGTTAGTTTGCAAAGGGAAAGAACTTCTGCAAGCATACAAGATTCAAAATGTATTTACGCCCCCTGACAGCTTCTGTTCATGTTTGGGACTCGATAGAAACACAGATGTTAGGAATAGTAATATGAGAAAGGCTGCTTCTCGTGATAATTTGGCTGACAACTATTTATATTGTCCTAAGGCTGTAGATCTACAGGACAAGGATTTAAAGCATTTTCAGTGGCATTGGGAAAAGGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAATGCACTTCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTACGTCATAAAACTAGTGCTACCAAACGTGGTCAACATTTGGACGTGGAAACTCTTGATTGCTTAGATTGGTGTGAGGGGGGAATCAATATCCACCAATTCTTTACTGGGTATACAGAAGGTCGAATGGATTGGCTTGGTTGGCCTCAGATATTGAAATTAAAAGATTGGCCTCCTTCTAATCTTTTTGAGGAACAGTTGCCTCGTCATTTTGTTGAGTTCATATCATCCTTACCCTTCAAGGAGTATACTGATCCTCTCAGAGGTGCTCTTAACCTTTCTGTGAAGTTACCTGATGATTGTCTAAAGCCAGACATGGGGCCAAAGTCTTATATTGCTTATGGATTTCCTCCGGAGCTTGGGCGTGGTGATTCTGTGACTAAGATCCATTGTGATATGTCTGATGCAGTAAATGTGTTGACTCATATTGCTGAAGTGAAATTGAATTCTAAGCAACTTACTGCCATTGAGAAGTTGAAACAAAAGCATTTTGAGCAGGACAGAAGGGAGTTATTTGGTGATGATCATGGTGGAGAAACTAACACTGACATGCTTACTAATACATCCTCTATCATAAATGCTTTGGACAACCAGAACAGTGTTCAAGTCTTGGAACATGAAAGTGGATTATGTGATTGGAAAGAAGTTGACCAGTTCCATCAATCTGGTTATAATGAGATTGCCACTGCTAAGGAGGATGGTCTTTTATGTGAATCAGAAGAAGTCAAAGAGGTTGACAAAGTGGAAATAAAACTGGAAAATGGTTTGTTGTTTGGTGGTGATGCTTCAGAAGGTGCTCTCTGGGATATTTTTCGGAGGCAGGATGTATCTAAATTGCAAGAATATCTGAAGAAGCATTTCCGAGAGTTCAGGCATGTCTATTGCTGTCCTTTAAAGCAGGTTATTCACCCCATTCATGACCAGTCTTTTTATCTTACCATGGAGCATAAGAAGAAGCTTAAGGAGGAGTATGGAATTGAGCCGTGGACTTTTATTCAAAAGTTAGGAGATGCTGTTTTTATTCCTGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATCAAGGTTGCGTTGGATTTTGTGTCCCCTGAAAATGTTGGGGAGTGCTTTCGGTTGACAGAGGAATTTCGCACACTTCCAATAAATCACAAGTCCACAGAGGACAAATTGGAGTCACCAAGATTCCACCGAGGAAAATGCAATATGGTAAAGTGA 2718 0.4198 MSRNKVVEMTTDCILVDKVRVHSLKLVWLFPMEEGNAEPRVDANPNPSHEETQCLDSGRVQEVKKKRGRKSKKEKEEMEKKKMLDATAAEEGGVSEKRPIRKRKNDDGNGELGMSGAEKPYRGRKQEMMSKKVTKRRAKYGEEEPLTCHQCKRNDKGRVVRCSTCNKKRFCLFCIRAWYPHLKEEDIAEACPVCRGNCNCKACLSSVGLINQMKKATMKKGEKVELSLYLLQVLLPFIRQLDEEQMIENETEAKIQGLSVSELNIVKADFSLQERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPIELEFVWQGRGYLHAEKAIEKVEQIESNAGAKPEGHEWSRSGWHSHSNGSIPCPKVNDECNHGFLELRSILGQHFISELVCKGKELLQAYKIQNVFTPPDSFCSCLGLDRNTDVRNSNMRKAASRDNLADNYLYCPKAVDLQDKDLKHFQWHWEKGEPVIVSNVLECTSGLSWEPLVMWRALRHKTSATKRGQHLDVETLDCLDWCEGGINIHQFFTGYTEGRMDWLGWPQILKLKDWPPSNLFEEQLPRHFVEFISSLPFKEYTDPLRGALNLSVKLPDDCLKPDMGPKSYIAYGFPPELGRGDSVTKIHCDMSDAVNVLTHIAEVKLNSKQLTAIEKLKQKHFEQDRRELFGDDHGGETNTDMLTNTSSIINALDNQNSVQVLEHESGLCDWKEVDQFHQSGYNEIATAKEDGLLCESEEVKEVDKVEIKLENGLLFGGDASEGALWDIFRRQDVSKLQEYLKKHFREFRHVYCCPLKQVIHPIHDQSFYLTMEHKKKLKEEYGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHKSTEDKLESPRFHRGKCNMVK* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00412 905 Gene3D Cupin 446 887 - -
Phac3g00412 905 MobiDBLite consensus disorder prediction 37 131 - -
Phac3g00412 905 ProSiteProfiles Zinc finger RING-type profile. 148 195 IPR001841 -
Phac3g00412 905 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 50 892 IPR045109 GO:0032454|GO:0033169
Phac3g00412 905 SMART cupin_9 566 878 IPR003347 -
Phac3g00412 905 MobiDBLite consensus disorder prediction 72 109 - -
Phac3g00412 905 Pfam JmjC domain, hydroxylase 765 861 IPR003347 -
Phac3g00412 905 ProSiteProfiles JmjC domain profile. 585 878 IPR003347 -
Phac3g00412 905 SUPERFAMILY Clavaminate synthase-like 463 892 - -
Phac3g00412 905 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 142 210 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00412 Phac-Chr3 2975050 2989433 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac3g00412 JmjC 3e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00412 K15601 - gmx:100797799 1342.02