Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00395 ATGTTAGGCTTCCATTTTCTTGTCTCTTGTTTCATGTTTCTTGTCTTGATTGCAGCTCAGGGGGAAAAGCACCAAGAGCACTTTGATTTTCCTGTTCAATCATGTGGGTATCTGGGGGAAATCACCTTCCCCTTCACAACAAGCTCCGATCCAAAATGTGGGTTCCGAATAAGGGGCTGTGACGACCCCACTGCAGATAAAGAAATCTCACTCACAGACCAAAACTGGTATAAAATTGATACCATATTTCATCCTCCCGACCTCAATAACCTTTCAATCATCATCCATTACCCTGATTTTGACACTCCAGAGCAGCTTCAAAAGCCTTTCGAGATAGAAGAAAAGCATTTCACGATCGGCAACAACATTAGCTTCTTCGGATGCCTGCGGAACTCCTACGACAACGATGTCGGAATCTCTTCAAACATGTCCCTTTACAGACACTGTCCTAACCACGACATGTACTACAATTCTTCCCTGGCTCTCTACTATCCCTTGCCCATCAATCCATTCACATGCTTGCTTTTTCAGCTTCCTCAATTTAGATCTGCTAGCGCTTGCCCTTCGTGTACATTTCTGTTTTCTTTTCTCGAAATTAAATTTAACATACCCGAAGATTGCAAACCCTGTCAGCATCCCCACTGTGAGTTTGAGTTTGAGGAGGGACAAGGCCTCAAATGTTACCGAGACGATCATGATGCACAACATCCTCCTCTTTCCTCGCCTCCGGTTAGTTCAACTGCAACGGTCAAGGATAAGAAAATAGGTTTATACGTTGGAATACCAATCCTGATTGCAGTTTTTGCCTTGGTGGTGGTTATTGTTTTGGTGTTGAAAGGAAGAAAGAAAGATTCAGGCCTCGAAAAGAAATCAAGAAGCGGTTATTCTTCTTCCTTGAGAAATAGAACGTCCATGGAAAGTGGAGGTGTCTACTTTGGGATCCCTGTCTTCTCCTTCGACGACCTCCGAGAGGCAACCAACAACTTTGATCATGCAAGGAAGCTTGGAGAAGGAGGCTTTGGAACTGTTTACTTTGGAATTCTTGGAGATGGTCGTGAAGTTGCAGTGAAGCGGCTGTTCGAGCGCAACTACAGGCCAGTGGACTCATTCACCAACGAAATTCAGATCCTCACACGTCTGCGACACAAAAACCTGGTCTCCCTCTACGGCTGCACTTCGCGTCACAGCCGCGACTTACTCCTCGTGTACGAGCACATCCCAAACGGCACACTCAGTTCTCATCTCCATGCTGATCAAGGAAACTCACACTTTTTGCCATGGCATTTGAGAATGAAAATCGCAGTGCAAACCGCGAGTGCATTGGCTTATCTCCACGCTTCCGACATCATCCACCGGGATGTGAAAACCAGCAACATTCTCCTGGACAATGAGTTCGATGCTAAGGTTACGGATTTTGGTCTTTCGAAACTGTTCCCTGATGATGTCACTCACATTTCCACTGCTCCAAGGGGGACCCCGGGTTATGTTGATCCGGATTATCGCCTGTGCCACCAGCTCACAACAAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTGTTGAGTTGATATCATCTCTCACACCAGTTGACGTGAATAGGAACAGGGAAGACATTAAGTTGGCAAATCTTGCCATTAGGAAGATTCAAATGGGGACACTTTTTGAGATGGTTGATCCTTCCCTTGGTTTTGAGTCAGATGAGAAACTGAAAGTGATGATAGGTTCGGTGGCAGAGTTGGCTTTTCAGTGTCTGCAAGAGGACAAGGAATTGAGACCCTCTATGGGAGAAGTATTGGAGGTGCTGGAGAGAATTCACAGTGGCAGGGATGAGGCAGGGAATCTGGAGGGGATTGTGGTTCATGGTGCTACCAGGGCTTCTCAAAGCTATGCTCACCCACCTCTTCCAAACTCTCTCGTGACCCCACAACAGGCCCTTTGGAAAACAAACTGA 1950 0.4626 MLGFHFLVSCFMFLVLIAAQGEKHQEHFDFPVQSCGYLGEITFPFTTSSDPKCGFRIRGCDDPTADKEISLTDQNWYKIDTIFHPPDLNNLSIIIHYPDFDTPEQLQKPFEIEEKHFTIGNNISFFGCLRNSYDNDVGISSNMSLYRHCPNHDMYYNSSLALYYPLPINPFTCLLFQLPQFRSASACPSCTFLFSFLEIKFNIPEDCKPCQHPHCEFEFEEGQGLKCYRDDHDAQHPPLSSPPVSSTATVKDKKIGLYVGIPILIAVFALVVVIVLVLKGRKKDSGLEKKSRSGYSSSLRNRTSMESGGVYFGIPVFSFDDLREATNNFDHARKLGEGGFGTVYFGILGDGREVAVKRLFERNYRPVDSFTNEIQILTRLRHKNLVSLYGCTSRHSRDLLLVYEHIPNGTLSSHLHADQGNSHFLPWHLRMKIAVQTASALAYLHASDIIHRDVKTSNILLDNEFDAKVTDFGLSKLFPDDVTHISTAPRGTPGYVDPDYRLCHQLTTKSDVYSFGVVLVELISSLTPVDVNRNREDIKLANLAIRKIQMGTLFEMVDPSLGFESDEKLKVMIGSVAELAFQCLQEDKELRPSMGEVLEVLERIHSGRDEAGNLEGIVVHGATRASQSYAHPPLPNSLVTPQQALWKTN* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00395 649 FunFam Wall-associated receptor kinase-like 20 406 613 - -
Phac3g00395 649 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Phac3g00395 649 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00395 649 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 638 IPR044652 GO:0004672
Phac3g00395 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Phac3g00395 649 Gene3D Phosphorylase Kinase; domain 1 303 405 - -
Phac3g00395 649 Gene3D Transferase(Phosphotransferase) domain 1 406 612 - -
Phac3g00395 649 CDD STKc_IRAK 335 604 - -
Phac3g00395 649 Pfam Protein kinase domain 331 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00395 649 SUPERFAMILY Protein kinase-like (PK-like) 311 605 IPR011009 -
Phac3g00395 649 SMART serkin_6 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00395 Phac-Chr3 2820913 2824318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00395 252 606 Receptor kinase-like Gene Family AT1G25390 54.494 1.03e-129 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac3g00395 Pkinase 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00395 - - var:108334729 901.738