Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00393 ATGGCATCAGCATCACCCTCTTCTCCTTTCCTCCTCCTTCTGTTGCTTCACCTCTCTCTCCTCTCTCTTCTCGCTCACTCCACCAACCCTGACTTCCACACTCTAATGTCCTTCAAAGCCGCTTCCGACCCTTCCGACACACTCGCCCACTGGAACTCCACAACCTCAAACCCCTGCACCTGGTACGGTGTCTCTTGTCTTCGCAACCGTGTCTCTCGCCTCGTCCTCGAAAACCTAAACCTCACCGGCTCCATCCACCCCCTAACCTCCCTCACCCAACTTCGCATCCTCAGCCTAAAACGAAACCGTTTCAACGGCCCCATCACCTCTCTCGCCAACCTCACCACCCTCCGCCTTCTCTTCCTCTCCCACAACAACTTCTCCGGCCACTTCCCCGCCGCCCTCACCTCTCTCTACCGCCTCGATCTCTCTCACAACAGCCTCTCCGGCCAAATTCCCGCCACGCTCAGCCGCTGGACCCACCTCCTCACCCTCCAGCTCGACTCCAACCGCCTCCAAGGCCGCATTCCCAGCAACATCAACCTCTCTCATCTCCAACACTTTAACGTCTCAAACAACCTCCTATCGGGTCAAATACCCGAATCGCTCTCGGGTTTCCCTGGATCCGCGTTCTCTCACAACCCCTCCCTCTGCGGAGCTCCCTTGCAAGAATGCAAAGGCAAAAGCAAAGGCGAAGCAGTCATCCCGGCCCTGGCTTCCCCGTTGAAGCCGCGAAGCGACAGTGTTTCCGGCAAGCCCCGGCGGCGGGAGAGGATAATGGGGGTGTTGGTCTTGATCGGTATTGTGGTGGGCGACGTGGTGGTCCTGGGTTTGGTGTCGCTGCTTCTGTACTGCTATTTCTGGAGGAACTACTCTGCTGCTGCAGAGTTGAGGAAGGAGGGAAAAGAGAGGAGGAGTTGGAAGATGGTGGATGATGGAATGGTGTTTTTGGAAGGGGTGAGGAGGTTTGAGTTGGAGGAGCTGTTGCGTGCGTCGGCGGAGATGTTGGGGAAGGGTGCGTTTGGGAGTGCCTATAAAGCGGTGCTTGACGACGGAACCGTGGTGGCGGTGAAGAGGCTGAAGGAGGTTAGTGTCGGAGGGAAGAGAGAGTTCCAGCAACGAATGGAAGTGCTTGGAAGGTTGAGACACTGTAACGTCGTTAGTTTGAGAGCTTACTGTTTCACCAAAGATGACAAGTTTCTCGTCTCTGATTACATGTGCAACGCTAGCTTCTCTTTCCTTCTCCACGGTAATCGAGGCCCAGGAAGGACCCCACTGGAGTGGACAACGAGGTTGAAGATCGCAGCTGGAGCGGCACGAGGAGTGGCATTCATTCACAAACATAAACTCACCCACGGTAACATCAAAGCCACCAATGTTCTTATTGACGTGGCGGGCAACGCGCGCGTCGCGGACTTCGGTCTCTCCATCTTCGCTACCGCCTCCACTTTCAGATCCAACGGCTACCTCGCGCCAGAGGTATCGGACGGTCGCAAGCAGACCCAGATGTCTGACGTGTACTCCTTTGGCGTCCTATTGATAGAGATGCTGACGGGGAAGTGCCCTTCCGCCGTGGGCGGCGGACACGAGGCGGCGGTGGACCTTCCCAGGTGGGTCCGGTCGGTGGAGAGAGAGGAGTGGACGGCGGAGGTGTTCGATCTAGAATTGATGAGCTATAAGGACATTGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATAATGTGCACTGCGACCGAACCTCATCAACGGCTGAGGATGAGCCACGTGGTGAAGAGGATCGAGGAGTTGCGTGGGGTCCAGATGTCGCCGTGTGATGAAGGGTTGGACTCGCTGTCTGAGTCACTCTCCGTGCCTGAAGCAAGGGCTAGTCAATGA 1878 0.5655 MASASPSSPFLLLLLLHLSLLSLLAHSTNPDFHTLMSFKAASDPSDTLAHWNSTTSNPCTWYGVSCLRNRVSRLVLENLNLTGSIHPLTSLTQLRILSLKRNRFNGPITSLANLTTLRLLFLSHNNFSGHFPAALTSLYRLDLSHNSLSGQIPATLSRWTHLLTLQLDSNRLQGRIPSNINLSHLQHFNVSNNLLSGQIPESLSGFPGSAFSHNPSLCGAPLQECKGKSKGEAVIPALASPLKPRSDSVSGKPRRRERIMGVLVLIGIVVGDVVVLGLVSLLLYCYFWRNYSAAAELRKEGKERRSWKMVDDGMVFLEGVRRFELEELLRASAEMLGKGAFGSAYKAVLDDGTVVAVKRLKEVSVGGKREFQQRMEVLGRLRHCNVVSLRAYCFTKDDKFLVSDYMCNASFSFLLHGNRGPGRTPLEWTTRLKIAAGAARGVAFIHKHKLTHGNIKATNVLIDVAGNARVADFGLSIFATASTFRSNGYLAPEVSDGRKQTQMSDVYSFGVLLIEMLTGKCPSAVGGGHEAAVDLPRWVRSVEREEWTAEVFDLELMSYKDIEEEMVALLQIAIMCTATEPHQRLRMSHVVKRIEELRGVQMSPCDEGLDSLSESLSVPEARASQ* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00393 625 Gene3D Ribonuclease Inhibitor 32 136 IPR032675 -
Phac3g00393 625 Pfam Protein kinase domain 334 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00393 625 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 599 IPR046959 -
Phac3g00393 625 ProSiteProfiles Protein kinase domain profile. 330 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g00393 625 SUPERFAMILY L domain-like 35 223 - -
Phac3g00393 625 Gene3D Transferase(Phosphotransferase) domain 1 406 608 - -
Phac3g00393 625 Gene3D Phosphorylase Kinase; domain 1 296 405 - -
Phac3g00393 625 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Phac3g00393 625 FunFam Leucine-rich repeat receptor-like protein kinase 135 225 - -
Phac3g00393 625 SUPERFAMILY Protein kinase-like (PK-like) 334 594 IPR011009 -
Phac3g00393 625 Gene3D Ribonuclease Inhibitor 137 225 IPR032675 -
Phac3g00393 625 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00393 Phac-Chr3 2799332 2803263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00393 31 620 Receptor kinase-like Gene Family AT1G68400 60.126 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac3g00393 Pkinase 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00393 - - vun:114168386 1017.3